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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182444153
OIKR01001973
196621
Bacillota
GTC
Asp
>WENV182444119
OIKR01000143
235098
Bacillota
GAC
Val
>WENV182444149
OIKR01001880
44854
Bacillota
TGA
Ser
>WENV182444155
OIKR01001973
304022
Bacillota
GCC
Gly
>WENV182444137
OIKR01000437
338147
Bacillota
CTC
Glu
>WENV182444161
OIKR01002394
235114
Bacillota
TTT
Lys
>WENV182444184
OIKR01009072
44859
Bacillota
AAG
Leu
>WENV182444154
OIKR01001973
235079
Bacillota
GAA
Phe
>WENV182444130
OIKR01000344
338149
Bacillota
CTC
Glu
>WENV182444159
OIKR01002394
144610
Bacillota
GTG
His
>WENV182444186
OIKR01010233
411547
Bacillota
CTG
Gln
>WENV182444150
OIKR01001880
4624
Bacillota
GCT
Ser
>WENV182444142
OIKR01000920
235095
Bacillota
GGT
Thr
>WENV182444132
OIKR01000366
235142
Bacillota
CTT
Lys
>WENV182444116
OIKR01000084
80612
Bacillota
GTA
Tyr
>WENV182444145
OIKR01001286
235124
Bacillota
TGG
Pro
>WENV182444148
OIKR01001766
144583
Bacillota
ACG
Arg
>WENV182444131
OIKR01000344
144621
Bacillota
GTT
Asn
>WENV182444167
OIKR01002868
58712
Bacillota
CAG
Leu
>WENV182444122
OIKR01000156
95563
Bacillota
GTA
Tyr
>WENV182444175
OIKR01004669
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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