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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182445167
OIKV01000203
196621
Bacillota
GTC
Asp
>WENV182445159
OIKV01000162
309417
Bacillota
GGC
Ala
>WENV182445204
OIKV01001433
144612
Bacillota
TCT
Arg
>WENV182445174
OIKV01000273
235098
Bacillota
GAC
Val
>WENV182445164
OIKV01000192
44854
Bacillota
TGA
Ser
>WENV182445191
OIKV01000830
304022
Bacillota
GCC
Gly
>WENV182445187
OIKV01000611
11034
Bacillota
GGA
Ser
>WENV182445230
OIKV01003654
235079
Bacillota
GAA
Phe
>WENV182445211
OIKV01001804
338149
Bacillota
CTC
Glu
>WENV182445173
OIKV01000268
245298
Bacillota
CGG
Pro
>WENV182445172
OIKV01000268
411547
Bacillota
CTG
Gln
>WENV182445165
OIKV01000192
4624
Bacillota
GCT
Ser
>WENV182445168
OIKV01000203
235095
Bacillota
GGT
Thr
>WENV182445170
OIKV01000203
235095
Bacillota
GGT
Thr
>WENV182445184
OIKV01000486
411549
Bacillota
TTG
Gln
>WENV182445208
OIKV01001700
148188
Bacillota
CCG
Arg
>WENV182445228
OIKV01003251
80612
Bacillota
GTA
Tyr
>WENV182445195
OIKV01000929
235127
Bacillota
TTT
Lys
>WENV182445214
OIKV01002017
235124
Bacillota
TGG
Pro
>WENV182445160
OIKV01000176
338129
Bacillota
TGT
Thr
>WENV182445222
OIKV01002609
144583
Bacillota
ACG
Arg
>WENV182445166
OIKV01000203
235171
Bacillota
CCA
Trp
>WENV182445171
OIKV01000227
144621
Bacillota
GTT
Asn
>WENV182445206
OIKV01001433
58712
Bacillota
CAG
Leu
>WENV182445219
OIKV01002295
245296
Bacillota
CCC
Gly
>WENV182445212
OIKV01001804
272992
Bacillota
CTT
Lys
>WENV182445151
OIKV01000109
144594
Bacillota
CAC
Val
>WENV182445202
OIKV01001186
272488
Bacillota
GAA
Phe
>WENV182445163
OIKV01000185
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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