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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182449608
OILS01004926
235097
Bacteroidota
TTT
Lys
>WENV182449384
OILS01000012
95987
Bacteroidota
CAA
Leu
>WENV182449410
OILS01000080
339412
Bacteroidota
GGT
Thr
>WENV182449393
OILS01000036
235102
Bacteroidota
CGT
Thr
>WENV182449643
OILS01007707
243025
Bacteroidota
CAT
Met
>WENV182449433
OILS01000184
97336
Bacteroidota
CAG
Leu
>WENV182449629
OILS01006781
338486
Bacteroidota
CAT
Met
>WENV182449422
OILS01000139
48053
Bacteroidota
TGA
Ser
>WENV182449425
OILS01000160
48053
Bacteroidota
TGA
Ser
>WENV182449490
OILS01000656
413663
Bacteroidota
CTG
Gln
>WENV182449491
OILS01000656
413663
Bacteroidota
CTG
Gln
>WENV182449507
OILS01001055
415410
Bacteroidota
TTG
Gln
>WENV182449411
OILS01000080
237797
Bacteroidota
CCA
Trp
>WENV182449385
OILS01000016
412479
Bacteroidota
TTG
Gln
>WENV182449731
OILS01030378
237247
Bacteroidota
TTT
Lys
>WENV182449388
OILS01000023
147147
Bacteroidota
GTG
His
>WENV182449389
OILS01000023
147147
Bacteroidota
GTG
His
>WENV182449669
OILS01010486
341950
Bacteroidota
>WENV182449387
OILS01000020
338124
Bacteroidota
CCG
Arg
>WENV182449402
OILS01000063
338132
Bacteroidota
GCA
Cys
>WENV182449723
OILS01026240
338132
Bacteroidota
GCA
Cys
>WENV182449382
OILS01000008
37076
Bacteroidota
TAA
Leu
>WENV182449680
OILS01014586
58714
Bacteroidota
CAA
Leu
>WENV182449414
OILS01000096
144656
Bacteroidota
GTG
His
>WENV182449413
OILS01000082
235207
Bacteroidota
CAT
Met
>WENV182449697
OILS01019573
144659
Bacteroidota
GTG
His
>WENV182449428
OILS01000174
80607
Bacteroidota
GTA
Tyr
>WENV182449601
OILS01004606
113604
Bacteroidota
>WENV182449420
OILS01000137
344769
Bacteroidota
CTC
Glu
>WENV182449483
OILS01000479
154643
Bacteroidota
CAT
Met
>WENV182449392
OILS01000030
144590
Bacteroidota
GTT
Asn
>WENV182449439
OILS01000212
95559
Bacteroidota
TAG
Leu
>WENV182449395
OILS01000051
419272
Bacteroidota
CTG
Gln
>WENV182449461
OILS01000294
144655
Bacteroidota
GGC
Ala
>WENV182449719
OILS01025133
338164
Bacteroidota
TTC
Glu
>WENV182449575
OILS01003111
95875
Bacteroidota
TAG
Leu
>WENV182449396
OILS01000051
132360
Bacteroidota
GGG
Pro
>WENV182449522
OILS01001528
353927
Bacteroidota
TTC
Glu
>WENV182449510
OILS01001125
414426
Bacteroidota
CTG
Gln
>WENV182449457
OILS01000269
16224
Bacteroidota
GGA
Ser
>WENV182449406
OILS01000074
16220
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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