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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182453076
OIMG01000242
235102
Bacteroidota
CGT
Thr
>WENV182453050
OIMG01000031
48053
Bacteroidota
TGA
Ser
>WENV182453039
OIMG01000005
415410
Bacteroidota
TTG
Gln
>WENV182453053
OIMG01000039
338124
Bacteroidota
CCG
Arg
>WENV182453093
OIMG01000984
338132
Bacteroidota
GCA
Cys
>WENV182453084
OIMG01000442
144656
Bacteroidota
GTG
His
>WENV182453070
OIMG01000123
235207
Bacteroidota
CAT
Met
>WENV182453040
OIMG01000007
80607
Bacteroidota
GTA
Tyr
>WENV182453075
OIMG01000225
144590
Bacteroidota
GTT
Asn
>WENV182453068
OIMG01000103
95559
Bacteroidota
TAG
Leu
>WENV182453037
OIMG01000002
419272
Bacteroidota
CTG
Gln
>WENV182453079
OIMG01000331
144655
Bacteroidota
GGC
Ala
>WENV182453038
OIMG01000002
132360
Bacteroidota
GGG
Pro
>WENV182453074
OIMG01000218
16224
Bacteroidota
GGA
Ser
>WENV182453049
OIMG01000029
16220
Bacteroidota
GGA
Ser
>WENV182453041
OIMG01000014
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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