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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182461662
OINU01000176
235097
Bacteroidota
TTT
Lys
>WENV182461694
OINU01000556
235102
Bacteroidota
CGT
Thr
>WENV182461644
OINU01000041
415410
Bacteroidota
TTG
Gln
>WENV182461719
OINU01003347
411543
Bacteroidota
CTG
Gln
>WENV182461647
OINU01000072
338124
Bacteroidota
CCG
Arg
>WENV182461666
OINU01000198
338132
Bacteroidota
GCA
Cys
>WENV182461656
OINU01000146
193809
Bacteroidota
CAT
Met
>WENV182461683
OINU01000365
144656
Bacteroidota
GTG
His
>WENV182461679
OINU01000220
80607
Bacteroidota
GTA
Tyr
>WENV182461676
OINU01000217
144590
Bacteroidota
GTT
Asn
>WENV182461677
OINU01000217
144590
Bacteroidota
GTT
Asn
>WENV182461660
OINU01000154
95559
Bacteroidota
TAG
Leu
>WENV182461681
OINU01000249
419272
Bacteroidota
CTG
Gln
>WENV182461661
OINU01000167
144655
Bacteroidota
GGC
Ala
>WENV182461659
OINU01000153
44852
Bacteroidota
TAA
Leu
>WENV182461648
OINU01000074
50727
Bacteroidota
TGA
Ser
>WENV182461653
OINU01000117
50727
Bacteroidota
TGA
Ser
>WENV182461641
OINU01000009
16224
Bacteroidota
GGA
Ser
>WENV182461642
OINU01000015
16220
Bacteroidota
GGA
Ser
>WENV182461646
OINU01000047
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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