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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182465175
OIOM01000008
235097
Bacteroidota
TTT
Lys
>WENV182465252
OIOM01000305
235102
Bacteroidota
CGT
Thr
>WENV182465169
OIOM01000004
95618
Bacteroidota
TAG
Leu
>WENV182465168
OIOM01000001
411543
Bacteroidota
CTG
Gln
>WENV182465195
OIOM01000026
436206
Bacteroidota
TTG
Gln
>WENV182465196
OIOM01000027
235182
Bacteroidota
>WENV182465230
OIOM01000128
272983
Bacteroidota
CGT
Thr
>WENV182465192
OIOM01000018
338124
Bacteroidota
CCG
Arg
>WENV182465173
OIOM01000007
338132
Bacteroidota
GCA
Cys
>WENV182465180
OIOM01000012
338132
Bacteroidota
GCA
Cys
>WENV182465228
OIOM01000125
144688
Bacteroidota
CAT
Met
>WENV182465179
OIOM01000011
181746
Bacteroidota
GGC
Ala
>WENV182465165
OIOM01000001
301449
Bacteroidota
CGG
Pro
>WENV182465297
OIOM01000771
301449
Bacteroidota
CGG
Pro
>WENV182465186
OIOM01000013
144933
Bacteroidota
TCT
Arg
>WENV182465203
OIOM01000035
144656
Bacteroidota
GTG
His
>WENV182465212
OIOM01000042
235207
Bacteroidota
CAT
Met
>WENV182465219
OIOM01000064
235207
Bacteroidota
CAT
Met
>WENV182465223
OIOM01000094
80607
Bacteroidota
GTA
Tyr
>WENV182465213
OIOM01000046
95559
Bacteroidota
TAG
Leu
>WENV182465170
OIOM01000006
419272
Bacteroidota
CTG
Gln
>WENV182465234
OIOM01000160
144655
Bacteroidota
GGC
Ala
>WENV182465218
OIOM01000061
338314
Bacteroidota
CCT
Arg
>WENV182465161
OIOM01000001
139743
Bacteroidota
GGG
Pro
>WENV182465172
OIOM01000006
139743
Bacteroidota
GGG
Pro
>WENV182465177
OIOM01000009
44852
Bacteroidota
TAA
Leu
>WENV182465318
OIOM01001765
19528
Bacteroidota
GGA
Ser
>WENV182465402
OIOM01008028
425638
Bacteroidota
CTG
Gln
>WENV182465424
OIOM01010344
19317
Bacteroidota
GGA
Ser
>WENV182465190
OIOM01000016
55270
Bacteroidota
TGA
Ser
>WENV182465191
OIOM01000016
55270
Bacteroidota
TGA
Ser
>WENV182465199
OIOM01000034
55270
Bacteroidota
TGA
Ser
>WENV182465202
OIOM01000035
55270
Bacteroidota
TGA
Ser
>WENV182465171
OIOM01000006
16220
Bacteroidota
GGA
Ser
>WENV182465335
OIOM01002271
338125
Bacteroidota
CCT
Arg
>WENV182465224
OIOM01000095
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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