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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182465859
OIOO01000216
37213
Bacillota
TGA
Ser
>WENV182465844
OIOO01000165
144612
Bacillota
TCT
Arg
>WENV182465880
OIOO01000400
235098
Bacillota
GAC
Val
>WENV182466190
OIOO01033390
80838
Bacillota
GTA
Tyr
>WENV182466044
OIOO01006354
23769
Bacillota
TAA
Leu
>WENV182465853
OIOO01000205
44854
Bacillota
TGA
Ser
>WENV182465895
OIOO01000777
235154
Bacillota
GTT
Asn
>WENV182466191
OIOO01033390
237285
Bacillota
TGT
Thr
>WENV182465995
OIOO01004022
147639
Bacillota
ACG
Arg
>WENV182465990
OIOO01004022
239020
Bacillota
TTT
Lys
>WENV182466037
OIOO01006111
238910
Bacillota
CTT
Lys
>WENV182465966
OIOO01002833
235294
Bacillota
TGC
Ala
>WENV182466097
OIOO01011425
340802
Bacillota
TTG
Gln
>WENV182465930
OIOO01001576
10926
Bacillota
CGA
Ser
>WENV182466038
OIOO01006191
37083
Bacillota
TGA
Ser
>WENV182465928
OIOO01001496
235091
Bacillota
CTT
Lys
>WENV182465863
OIOO01000272
11034
Bacillota
GGA
Ser
>WENV182465914
OIOO01000979
235079
Bacillota
GAA
Phe
>WENV182465935
OIOO01001665
16266
Bacillota
GCT
Ser
>WENV182466133
OIOO01017073
149041
Bacillota
GTC
Asp
>WENV182465961
OIOO01002376
338149
Bacillota
CTC
Glu
>WENV182466091
OIOO01010958
162445
Bacillota
CAT
Met
>WENV182465951
OIOO01002148
152492
Bacillota
GGG
Pro
>WENV182466011
OIOO01004849
153911
Bacillota
GAT
Ile
>WENV182465862
OIOO01000264
411547
Bacillota
CTG
Gln
>WENV182466069
OIOO01008380
147684
Bacillota
ACG
Arg
>WENV182465854
OIOO01000205
4624
Bacillota
GCT
Ser
>WENV182465873
OIOO01000350
412387
Bacillota
GCA
Cys
>WENV182465830
OIOO01000088
235095
Bacillota
GGT
Thr
>WENV182465831
OIOO01000088
235095
Bacillota
GGT
Thr
>WENV182465857
OIOO01000213
411549
Bacillota
TTG
Gln
>WENV182465892
OIOO01000754
148188
Bacillota
CCG
Arg
>WENV182465879
OIOO01000394
80612
Bacillota
GTA
Tyr
>WENV182466136
OIOO01017559
340080
Bacillota
CCT
Arg
>WENV182465849
OIOO01000198
235124
Bacillota
TGG
Pro
>WENV182465864
OIOO01000298
338129
Bacillota
TGT
Thr
>WENV182465886
OIOO01000577
144583
Bacillota
ACG
Arg
>WENV182466095
OIOO01011425
144672
Bacillota
TCT
Arg
>WENV182466123
OIOO01016735
238746
Bacillota
CGT
Thr
>WENV182465828
OIOO01000088
235171
Bacillota
CCA
Trp
>WENV182465962
OIOO01002376
144621
Bacillota
GTT
Asn
>WENV182465858
OIOO01000215
58712
Bacillota
CAG
Leu
>WENV182465888
OIOO01000587
245296
Bacillota
CCC
Gly
>WENV182465847
OIOO01000184
144594
Bacillota
CAC
Val
>WENV182465821
OIOO01000039
238945
Bacillota
GCC
Gly
>WENV182465877
OIOO01000394
249259
Bacillota
GCC
Gly
>WENV182466068
OIOO01008277
338131
Bacillota
GCC
Gly
>WENV182465871
OIOO01000334
338128
Bacillota
TTC
Glu
>WENV182465987
OIOO01004014
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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