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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182466208
OIOP01000001
144657
Bacteroidota
CGG
Pro
>WENV182466248
OIOP01000050
339341
Bacteroidota
GGT
Thr
>WENV182466293
OIOP01000149
58715
Bacteroidota
GAG
Leu
>WENV182466294
OIOP01000156
338486
Bacteroidota
CAT
Met
>WENV182466295
OIOP01000156
338486
Bacteroidota
CAT
Met
>WENV182466271
OIOP01000092
238121
Bacteroidota
CTT
Lys
>WENV182466310
OIOP01000331
238121
Bacteroidota
CTT
Lys
>WENV182466250
OIOP01000051
338132
Bacteroidota
GCA
Cys
>WENV182466219
OIOP01000009
144933
Bacteroidota
TCT
Arg
>WENV182466226
OIOP01000016
80614
Bacteroidota
>WENV182466247
OIOP01000050
80614
Bacteroidota
>WENV182466270
OIOP01000091
80614
Bacteroidota
>WENV182466231
OIOP01000020
95875
Bacteroidota
TAG
Leu
>WENV182466280
OIOP01000116
240012
Bacteroidota
CCC
Gly
>WENV182466204
OIOP01000001
185921
Bacteroidota
GTC
Asp
>WENV182466227
OIOP01000016
185921
Bacteroidota
GTC
Asp
>WENV182466235
OIOP01000031
235129
Bacteroidota
GCC
Gly
>WENV182466237
OIOP01000031
235129
Bacteroidota
GCC
Gly
>WENV182466291
OIOP01000149
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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