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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182473135
OIPS01000044
95987
Bacteroidota
CAA
Leu
>WENV182473111
OIPS01000002
339412
Bacteroidota
GGT
Thr
>WENV182473158
OIPS01000145
235102
Bacteroidota
CGT
Thr
>WENV182473336
OIPS01007443
144657
Bacteroidota
CGG
Pro
>WENV182473335
OIPS01007150
243025
Bacteroidota
CAT
Met
>WENV182473400
OIPS01015560
343138
Bacteroidota
CCT
Arg
>WENV182473440
OIPS01025891
17323
Bacteroidota
GGA
Ser
>WENV182473340
OIPS01007705
338486
Bacteroidota
CAT
Met
>WENV182473130
OIPS01000035
413663
Bacteroidota
CTG
Gln
>WENV182473156
OIPS01000108
413663
Bacteroidota
CTG
Gln
>WENV182473155
OIPS01000098
415410
Bacteroidota
TTG
Gln
>WENV182473112
OIPS01000002
237797
Bacteroidota
CCA
Trp
>WENV182473379
OIPS01011497
59689
Bacteroidota
CAG
Leu
>WENV182473131
OIPS01000038
412479
Bacteroidota
TTG
Gln
>WENV182473246
OIPS01001333
80835
Bacteroidota
GTA
Tyr
>WENV182473272
OIPS01002284
237247
Bacteroidota
TTT
Lys
>WENV182473149
OIPS01000074
147147
Bacteroidota
GTG
His
>WENV182473163
OIPS01000191
147147
Bacteroidota
GTG
His
>WENV182473127
OIPS01000028
338124
Bacteroidota
CCG
Arg
>WENV182473406
OIPS01017388
338132
Bacteroidota
GCA
Cys
>WENV182473132
OIPS01000038
37076
Bacteroidota
TAA
Leu
>WENV182473304
OIPS01004029
58714
Bacteroidota
CAA
Leu
>WENV182473128
OIPS01000030
144656
Bacteroidota
GTG
His
>WENV182473153
OIPS01000090
235207
Bacteroidota
CAT
Met
>WENV182473208
OIPS01000536
80607
Bacteroidota
GTA
Tyr
>WENV182473143
OIPS01000055
344769
Bacteroidota
CTC
Glu
>WENV182473444
OIPS01028673
80614
Bacteroidota
>WENV182473321
OIPS01006366
154643
Bacteroidota
CAT
Met
>WENV182473140
OIPS01000051
144590
Bacteroidota
GTT
Asn
>WENV182473169
OIPS01000227
95559
Bacteroidota
TAG
Leu
>WENV182473157
OIPS01000127
144655
Bacteroidota
GGC
Ala
>WENV182473332
OIPS01006956
240012
Bacteroidota
CCC
Gly
>WENV182473168
OIPS01000214
44852
Bacteroidota
TAA
Leu
>WENV182473303
OIPS01003975
150485
Bacteroidota
GTT
Asn
>WENV182473293
OIPS01003138
342206
Bacteroidota
TTC
Glu
>WENV182473180
OIPS01000288
146764
Bacteroidota
GTC
Asp
>WENV182473207
OIPS01000533
146764
Bacteroidota
GTC
Asp
>WENV182473231
OIPS01000812
16224
Bacteroidota
GGA
Ser
>WENV182473164
OIPS01000208
16220
Bacteroidota
GGA
Ser
>WENV182473378
OIPS01011497
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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