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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182476018
OIQE01000224
144612
Bacillota
TCT
Arg
>WENV182476043
OIQE01000627
235693
Bacillota
GGT
Thr
>WENV182476002
OIQE01000137
235098
Bacillota
GAC
Val
>WENV182476013
OIQE01000175
235098
Bacillota
GAC
Val
>WENV182475921
OIQE01000002
44854
Bacillota
TGA
Ser
>WENV182476028
OIQE01000357
144668
Bacillota
GTC
Asp
>WENV182476048
OIQE01000736
16834
Bacillota
GCT
Ser
>WENV182475968
OIQE01000050
11034
Bacillota
GGA
Ser
>WENV182475931
OIQE01000010
235117
Bacillota
TAC
Val
>WENV182476106
OIQE01009792
114002
Bacillota
CAA
Leu
>WENV182475933
OIQE01000010
235079
Bacillota
GAA
Phe
>WENV182476008
OIQE01000158
235079
Bacillota
GAA
Phe
>WENV182476058
OIQE01001142
243612
Bacillota
TAC
Val
>WENV182475914
OIQE01000002
338149
Bacillota
CTC
Glu
>WENV182475986
OIQE01000086
245298
Bacillota
CGG
Pro
>WENV182475913
OIQE01000001
411547
Bacillota
CTG
Gln
>WENV182475985
OIQE01000086
411547
Bacillota
CTG
Gln
>WENV182475922
OIQE01000002
4624
Bacillota
GCT
Ser
>WENV182475917
OIQE01000002
235095
Bacillota
GGT
Thr
>WENV182475920
OIQE01000002
235095
Bacillota
GGT
Thr
>WENV182476087
OIQE01004330
239832
Bacillota
TGT
Thr
>WENV182475926
OIQE01000006
411549
Bacillota
TTG
Gln
>WENV182475951
OIQE01000020
148188
Bacillota
CCG
Arg
>WENV182476059
OIQE01001356
80612
Bacillota
GTA
Tyr
>WENV182476071
OIQE01002071
235127
Bacillota
TTT
Lys
>WENV182476068
OIQE01002071
147674
Bacillota
TCT
Arg
>WENV182475987
OIQE01000086
235124
Bacillota
TGG
Pro
>WENV182475950
OIQE01000020
144583
Bacillota
ACG
Arg
>WENV182475918
OIQE01000002
235171
Bacillota
CCA
Trp
>WENV182475915
OIQE01000002
144621
Bacillota
GTT
Asn
>WENV182475940
OIQE01000014
144621
Bacillota
GTT
Asn
>WENV182476044
OIQE01000627
152491
Bacillota
CAT
Met
>WENV182476001
OIQE01000135
58712
Bacillota
CAG
Leu
>WENV182475935
OIQE01000010
245296
Bacillota
CCC
Gly
>WENV182475969
OIQE01000053
144594
Bacillota
CAC
Val
>WENV182476082
OIQE01003574
413657
Bacillota
CCC
Gly
>WENV182476075
OIQE01002399
238945
Bacillota
GCC
Gly
>WENV182475930
OIQE01000010
249259
Bacillota
GCC
Gly
>WENV182475934
OIQE01000010
249259
Bacillota
GCC
Gly
>WENV182476009
OIQE01000158
249259
Bacillota
GCC
Gly
>WENV182476010
OIQE01000158
249259
Bacillota
GCC
Gly
>WENV182475949
OIQE01000020
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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