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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182476418
OIQH01000001
235097
Bacteroidota
TTT
Lys
>WENV182476454
OIQH01000057
235097
Bacteroidota
TTT
Lys
>WENV182476500
OIQH01000303
235097
Bacteroidota
TTT
Lys
>WENV182476473
OIQH01000115
235102
Bacteroidota
CGT
Thr
>WENV182476644
OIQH01007350
267954
Bacteroidota
GCC
Gly
>WENV182476609
OIQH01003277
243025
Bacteroidota
CAT
Met
>WENV182476458
OIQH01000073
338155
Bacteroidota
CTC
Glu
>WENV182476589
OIQH01002426
153993
Bacteroidota
GAT
Ile
>WENV182476451
OIQH01000049
95618
Bacteroidota
TAG
Leu
>WENV182476463
OIQH01000081
415410
Bacteroidota
TTG
Gln
>WENV182476506
OIQH01000376
415410
Bacteroidota
TTG
Gln
>WENV182476486
OIQH01000191
411543
Bacteroidota
CTG
Gln
>WENV182476559
OIQH01001666
344692
Bacteroidota
GGT
Thr
>WENV182476511
OIQH01000458
235182
Bacteroidota
>WENV182476510
OIQH01000446
272983
Bacteroidota
CGT
Thr
>WENV182476450
OIQH01000045
338124
Bacteroidota
CCG
Arg
>WENV182476622
OIQH01004704
126641
Bacteroidota
TAC
Val
>WENV182476421
OIQH01000003
338132
Bacteroidota
GCA
Cys
>WENV182476468
OIQH01000103
338132
Bacteroidota
GCA
Cys
>WENV182476488
OIQH01000208
338132
Bacteroidota
GCA
Cys
>WENV182476491
OIQH01000233
338132
Bacteroidota
GCA
Cys
>WENV182476495
OIQH01000244
144688
Bacteroidota
CAT
Met
>WENV182476509
OIQH01000439
181746
Bacteroidota
GGC
Ala
>WENV182476437
OIQH01000025
301449
Bacteroidota
CGG
Pro
>WENV182476490
OIQH01000232
144933
Bacteroidota
TCT
Arg
>WENV182476438
OIQH01000026
144656
Bacteroidota
GTG
His
>WENV182476442
OIQH01000038
235207
Bacteroidota
CAT
Met
>WENV182476556
OIQH01001521
235207
Bacteroidota
CAT
Met
>WENV182476470
OIQH01000106
144596
Bacteroidota
GGC
Ala
>WENV182476430
OIQH01000014
80607
Bacteroidota
GTA
Tyr
>WENV182476546
OIQH01001187
80607
Bacteroidota
GTA
Tyr
>WENV182476667
OIQH01009885
80614
Bacteroidota
>WENV182476425
OIQH01000007
52358
Bacteroidota
TGA
Ser
>WENV182476483
OIQH01000172
52358
Bacteroidota
TGA
Ser
>WENV182476493
OIQH01000234
52358
Bacteroidota
TGA
Ser
>WENV182476507
OIQH01000389
52358
Bacteroidota
TGA
Ser
>WENV182476530
OIQH01000796
52358
Bacteroidota
TGA
Ser
>WENV182476611
OIQH01003459
154643
Bacteroidota
CAT
Met
>WENV182476502
OIQH01000340
95559
Bacteroidota
TAG
Leu
>WENV182476415
OIQH01000001
419272
Bacteroidota
CTG
Gln
>WENV182476462
OIQH01000078
144655
Bacteroidota
GGC
Ala
>WENV182476608
OIQH01003211
151121
Bacteroidota
CAT
Met
>WENV182476482
OIQH01000169
338314
Bacteroidota
CCT
Arg
>WENV182476693
OIQH01012888
280513
Bacteroidota
TTT
Lys
>WENV182476441
OIQH01000032
19528
Bacteroidota
GGA
Ser
>WENV182476417
OIQH01000001
132360
Bacteroidota
GGG
Pro
>WENV182476474
OIQH01000117
132360
Bacteroidota
GGG
Pro
>WENV182476552
OIQH01001470
425638
Bacteroidota
CTG
Gln
>WENV182476479
OIQH01000140
239647
Bacteroidota
TTT
Lys
>WENV182476499
OIQH01000297
19317
Bacteroidota
GGA
Ser
>WENV182476562
OIQH01001697
353927
Bacteroidota
TTC
Glu
>WENV182476504
OIQH01000361
185921
Bacteroidota
GTC
Asp
>WENV182476518
OIQH01000644
139062
Bacteroidota
TGG
Pro
>WENV182476538
OIQH01000957
414426
Bacteroidota
CTG
Gln
>WENV182476439
OIQH01000026
16224
Bacteroidota
GGA
Ser
>WENV182476416
OIQH01000001
16220
Bacteroidota
GGA
Ser
>WENV182476472
OIQH01000113
338125
Bacteroidota
CCT
Arg
>WENV182476487
OIQH01000193
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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