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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182478106
OIQM01001555
243647
Bacillota
TTT
Lys
>WENV182478126
OIQM01001934
196621
Bacillota
GTC
Asp
>WENV182478243
OIQM01008064
144612
Bacillota
TCT
Arg
>WENV182478298
OIQM01017029
144577
Bacillota
GAT
Ile
>WENV182478124
OIQM01001934
304022
Bacillota
GCC
Gly
>WENV182478115
OIQM01001769
144668
Bacillota
GTC
Asp
>WENV182478305
OIQM01018050
429429
Bacillota
CCA
Trp
>WENV182478134
OIQM01002005
313454
Bacillota
GAA
Phe
>WENV182478117
OIQM01001769
41154
Bacillota
TAA
Leu
>WENV182478222
OIQM01006212
11034
Bacillota
GGA
Ser
>WENV182478125
OIQM01001934
235117
Bacillota
TAC
Val
>WENV182477990
OIQM01000296
235079
Bacillota
GAA
Phe
>WENV182478297
OIQM01017029
235087
Bacillota
TGC
Ala
>WENV182478181
OIQM01003326
338149
Bacillota
CTC
Glu
>WENV182478121
OIQM01001834
245298
Bacillota
CGG
Pro
>WENV182478261
OIQM01009706
37269
Bacillota
TGA
Ser
>WENV182478133
OIQM01002005
169968
Bacillota
CAT
Met
>WENV182478344
OIQM01029669
201704
Bacillota
GAT
Ile
>WENV182478120
OIQM01001834
411547
Bacillota
CTG
Gln
>WENV182478176
OIQM01003196
411547
Bacillota
CTG
Gln
>WENV182478296
OIQM01016694
412387
Bacillota
GCA
Cys
>WENV182478127
OIQM01001934
235095
Bacillota
GGT
Thr
>WENV182478217
OIQM01005836
235095
Bacillota
GGT
Thr
>WENV182478148
OIQM01002380
411549
Bacillota
TTG
Gln
>WENV182478076
OIQM01000993
148188
Bacillota
CCG
Arg
>WENV182478077
OIQM01001018
80612
Bacillota
GTA
Tyr
>WENV182478000
OIQM01000333
163943
Bacillota
GTC
Asp
>WENV182478274
OIQM01011558
235124
Bacillota
TGG
Pro
>WENV182478184
OIQM01003373
338129
Bacillota
TGT
Thr
>WENV182478104
OIQM01001555
243613
Bacillota
GTG
His
>WENV182478215
OIQM01005620
144583
Bacillota
ACG
Arg
>WENV182478182
OIQM01003326
144621
Bacillota
GTT
Asn
>WENV182478245
OIQM01008064
58712
Bacillota
CAG
Leu
>WENV182478213
OIQM01005396
272992
Bacillota
CTT
Lys
>WENV182478332
OIQM01025127
196632
Bacillota
GTC
Asp
>WENV182478111
OIQM01001686
144594
Bacillota
CAC
Val
>WENV182478105
OIQM01001555
343027
Bacillota
TTG
Gln
>WENV182478016
OIQM01000430
338128
Bacillota
TTC
Glu
>WENV182478157
OIQM01002911
338128
Bacillota
TTC
Glu
>WENV182478333
OIQM01025127
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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