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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182478556
OIQP01000015
235097
Bacteroidota
TTT
Lys
>WENV182478612
OIQP01000182
95987
Bacteroidota
CAA
Leu
>WENV182478576
OIQP01000068
339412
Bacteroidota
GGT
Thr
>WENV182478653
OIQP01000637
235102
Bacteroidota
CGT
Thr
>WENV182478879
OIQP01024737
338155
Bacteroidota
CTC
Glu
>WENV182478705
OIQP01002306
58715
Bacteroidota
GAG
Leu
>WENV182478794
OIQP01006921
338486
Bacteroidota
CAT
Met
>WENV182478595
OIQP01000118
413663
Bacteroidota
CTG
Gln
>WENV182478553
OIQP01000009
415410
Bacteroidota
TTG
Gln
>WENV182478594
OIQP01000116
136244
Bacteroidota
TAC
Val
>WENV182478577
OIQP01000068
237797
Bacteroidota
CCA
Trp
>WENV182478617
OIQP01000209
412479
Bacteroidota
TTG
Gln
>WENV182478602
OIQP01000150
147147
Bacteroidota
GTG
His
>WENV182478548
OIQP01000004
155123
Bacteroidota
GTT
Asn
>WENV182478626
OIQP01000284
338124
Bacteroidota
CCG
Arg
>WENV182478850
OIQP01015392
146800
Bacteroidota
>WENV182478861
OIQP01018298
238121
Bacteroidota
CTT
Lys
>WENV182478554
OIQP01000010
338132
Bacteroidota
GCA
Cys
>WENV182478603
OIQP01000158
37076
Bacteroidota
TAA
Leu
>WENV182478664
OIQP01000818
235207
Bacteroidota
CAT
Met
>WENV182478601
OIQP01000144
80607
Bacteroidota
GTA
Tyr
>WENV182478605
OIQP01000159
344769
Bacteroidota
CTC
Glu
>WENV182478732
OIQP01003447
80614
Bacteroidota
>WENV182478564
OIQP01000030
52358
Bacteroidota
TGA
Ser
>WENV182478570
OIQP01000051
52358
Bacteroidota
TGA
Ser
>WENV182478689
OIQP01001781
154643
Bacteroidota
CAT
Met
>WENV182478584
OIQP01000087
144590
Bacteroidota
GTT
Asn
>WENV182478557
OIQP01000017
95559
Bacteroidota
TAG
Leu
>WENV182478593
OIQP01000115
419272
Bacteroidota
CTG
Gln
>WENV182478567
OIQP01000034
144655
Bacteroidota
GGC
Ala
>WENV182478648
OIQP01000554
95875
Bacteroidota
TAG
Leu
>WENV182478703
OIQP01002178
240012
Bacteroidota
CCC
Gly
>WENV182478899
OIQP01037603
19528
Bacteroidota
GGA
Ser
>WENV182478627
OIQP01000290
196394
Bacteroidota
GTC
Asp
>WENV182478555
OIQP01000015
132360
Bacteroidota
GGG
Pro
>WENV182478892
OIQP01031448
425638
Bacteroidota
CTG
Gln
>WENV182478807
OIQP01008038
353927
Bacteroidota
TTC
Glu
>WENV182478820
OIQP01008897
414426
Bacteroidota
CTG
Gln
>WENV182478546
OIQP01000001
16224
Bacteroidota
GGA
Ser
>WENV182478613
OIQP01000189
302002
Bacteroidota
CGT
Thr
>WENV182478573
OIQP01000056
16220
Bacteroidota
GGA
Ser
>WENV182478551
OIQP01000005
338125
Bacteroidota
CCT
Arg
>WENV182478691
OIQP01001851
235129
Bacteroidota
GCC
Gly
>WENV182478860
OIQP01017847
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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