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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182479919
OIQV01003979
24650
Bacillota
TAA
Leu
>WENV182479881
OIQV01001393
309417
Bacillota
GGC
Ala
>WENV182479848
OIQV01000260
144612
Bacillota
TCT
Arg
>WENV182479870
OIQV01000736
235098
Bacillota
GAC
Val
>WENV182479938
OIQV01007155
338152
Bacillota
TTC
Glu
>WENV182479837
OIQV01000173
44854
Bacillota
TGA
Ser
>WENV182479891
OIQV01001841
304022
Bacillota
GCC
Gly
>WENV182479869
OIQV01000719
11034
Bacillota
GGA
Ser
>WENV182479892
OIQV01001841
235117
Bacillota
TAC
Val
>WENV182479929
OIQV01005534
235079
Bacillota
GAA
Phe
>WENV182479882
OIQV01001524
235087
Bacillota
TGC
Ala
>WENV182479958
OIQV01011750
245298
Bacillota
CGG
Pro
>WENV182479900
OIQV01002572
411547
Bacillota
CTG
Gln
>WENV182479838
OIQV01000173
4624
Bacillota
GCT
Ser
>WENV182479855
OIQV01000436
411549
Bacillota
TTG
Gln
>WENV182479834
OIQV01000160
148188
Bacillota
CCG
Arg
>WENV182479858
OIQV01000486
80612
Bacillota
GTA
Tyr
>WENV182479895
OIQV01002013
235124
Bacillota
TGG
Pro
>WENV182479907
OIQV01003631
338129
Bacillota
TGT
Thr
>WENV182479839
OIQV01000173
144583
Bacillota
ACG
Arg
>WENV182479943
OIQV01008140
235171
Bacillota
CCA
Trp
>WENV182479879
OIQV01001382
58712
Bacillota
CAG
Leu
>WENV182479871
OIQV01000786
144594
Bacillota
CAC
Val
>WENV182479842
OIQV01000183
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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