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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182483304
OIRI01000015
235097
Bacteroidota
TTT
Lys
>WENV182483344
OIRI01000167
95987
Bacteroidota
CAA
Leu
>WENV182483318
OIRI01000046
339412
Bacteroidota
GGT
Thr
>WENV182483345
OIRI01000192
235102
Bacteroidota
CGT
Thr
>WENV182483611
OIRI01025956
144657
Bacteroidota
CGG
Pro
>WENV182483499
OIRI01004211
243025
Bacteroidota
CAT
Met
>WENV182483591
OIRI01017252
338155
Bacteroidota
CTC
Glu
>WENV182483471
OIRI01002578
153993
Bacteroidota
GAT
Ile
>WENV182483607
OIRI01024340
339341
Bacteroidota
GGT
Thr
>WENV182483408
OIRI01000767
58715
Bacteroidota
GAG
Leu
>WENV182483485
OIRI01003210
338486
Bacteroidota
CAT
Met
>WENV182483338
OIRI01000124
394247
Bacteroidota
CTC
Glu
>WENV182483311
OIRI01000034
413663
Bacteroidota
CTG
Gln
>WENV182483404
OIRI01000758
136244
Bacteroidota
TAC
Val
>WENV182483319
OIRI01000046
237797
Bacteroidota
CCA
Trp
>WENV182483407
OIRI01000767
59689
Bacteroidota
CAG
Leu
>WENV182483342
OIRI01000158
436206
Bacteroidota
TTG
Gln
>WENV182483315
OIRI01000042
412479
Bacteroidota
TTG
Gln
>WENV182483370
OIRI01000295
147147
Bacteroidota
GTG
His
>WENV182483288
OIRI01000001
155123
Bacteroidota
GTT
Asn
>WENV182483368
OIRI01000280
338124
Bacteroidota
CCG
Arg
>WENV182483359
OIRI01000253
126641
Bacteroidota
TAC
Val
>WENV182483300
OIRI01000010
338132
Bacteroidota
GCA
Cys
>WENV182483316
OIRI01000042
37076
Bacteroidota
TAA
Leu
>WENV182483297
OIRI01000007
144933
Bacteroidota
TCT
Arg
>WENV182483291
OIRI01000002
144656
Bacteroidota
GTG
His
>WENV182483303
OIRI01000015
143169
Bacteroidota
GGG
Pro
>WENV182483552
OIRI01009817
144596
Bacteroidota
GGC
Ala
>WENV182483322
OIRI01000080
80607
Bacteroidota
GTA
Tyr
>WENV182483516
OIRI01004656
80614
Bacteroidota
>WENV182483534
OIRI01006127
154643
Bacteroidota
CAT
Met
>WENV182483326
OIRI01000088
144590
Bacteroidota
GTT
Asn
>WENV182483306
OIRI01000022
95559
Bacteroidota
TAG
Leu
>WENV182483307
OIRI01000023
144655
Bacteroidota
GGC
Ala
>WENV182483405
OIRI01000762
95875
Bacteroidota
TAG
Leu
>WENV182483310
OIRI01000033
139743
Bacteroidota
GGG
Pro
>WENV182483459
OIRI01002183
240012
Bacteroidota
CCC
Gly
>WENV182483365
OIRI01000263
196394
Bacteroidota
GTC
Asp
>WENV182483443
OIRI01001791
425638
Bacteroidota
CTG
Gln
>WENV182483360
OIRI01000255
94703
Bacteroidota
GTA
Tyr
>WENV182483455
OIRI01002027
353927
Bacteroidota
TTC
Glu
>WENV182483437
OIRI01001588
185921
Bacteroidota
GTC
Asp
>WENV182483340
OIRI01000146
56823
Bacteroidota
TGA
Ser
>WENV182483292
OIRI01000002
16224
Bacteroidota
GGA
Ser
>WENV182483339
OIRI01000145
302002
Bacteroidota
CGT
Thr
>WENV182483305
OIRI01000016
16220
Bacteroidota
GGA
Ser
>WENV182483295
OIRI01000005
338125
Bacteroidota
CCT
Arg
>WENV182483406
OIRI01000767
235129
Bacteroidota
GCC
Gly
>WENV182483366
OIRI01000273
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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