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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182484009
OIRK01000003
235097
Bacteroidota
TTT
Lys
>WENV182484024
OIRK01000012
235097
Bacteroidota
TTT
Lys
>WENV182484028
OIRK01000017
235102
Bacteroidota
CGT
Thr
>WENV182484184
OIRK01003003
144657
Bacteroidota
CGG
Pro
>WENV182484102
OIRK01000443
343138
Bacteroidota
CCT
Arg
>WENV182484195
OIRK01005061
58715
Bacteroidota
GAG
Leu
>WENV182484161
OIRK01002049
46165
Bacteroidota
TGA
Ser
>WENV182484145
OIRK01001118
95618
Bacteroidota
TAG
Leu
>WENV182484085
OIRK01000254
338486
Bacteroidota
CAT
Met
>WENV182484025
OIRK01000013
415410
Bacteroidota
TTG
Gln
>WENV182484057
OIRK01000103
415410
Bacteroidota
TTG
Gln
>WENV182484127
OIRK01000654
411543
Bacteroidota
CTG
Gln
>WENV182484072
OIRK01000169
59689
Bacteroidota
CAG
Leu
>WENV182484166
OIRK01002260
235182
Bacteroidota
>WENV182484138
OIRK01000767
272983
Bacteroidota
CGT
Thr
>WENV182484044
OIRK01000043
338124
Bacteroidota
CCG
Arg
>WENV182484094
OIRK01000285
235203
Bacteroidota
TTT
Lys
>WENV182484202
OIRK01005652
238121
Bacteroidota
CTT
Lys
>WENV182484029
OIRK01000019
338132
Bacteroidota
GCA
Cys
>WENV182484140
OIRK01000815
338132
Bacteroidota
GCA
Cys
>WENV182484154
OIRK01001511
144688
Bacteroidota
CAT
Met
>WENV182484007
OIRK01000002
193809
Bacteroidota
CAT
Met
>WENV182484137
OIRK01000765
58714
Bacteroidota
CAA
Leu
>WENV182484022
OIRK01000011
301449
Bacteroidota
CGG
Pro
>WENV182484169
OIRK01002333
144933
Bacteroidota
TCT
Arg
>WENV182484011
OIRK01000004
144656
Bacteroidota
GTG
His
>WENV182484034
OIRK01000025
235207
Bacteroidota
CAT
Met
>WENV182484141
OIRK01000984
144659
Bacteroidota
GTG
His
>WENV182484055
OIRK01000080
144596
Bacteroidota
GGC
Ala
>WENV182484026
OIRK01000014
80607
Bacteroidota
GTA
Tyr
>WENV182484074
OIRK01000209
80614
Bacteroidota
>WENV182484010
OIRK01000004
52358
Bacteroidota
TGA
Ser
>WENV182484035
OIRK01000027
52358
Bacteroidota
TGA
Ser
>WENV182484081
OIRK01000251
52358
Bacteroidota
TGA
Ser
>WENV182484117
OIRK01000505
52358
Bacteroidota
TGA
Ser
>WENV182484045
OIRK01000048
95559
Bacteroidota
TAG
Leu
>WENV182484017
OIRK01000009
419272
Bacteroidota
CTG
Gln
>WENV182484046
OIRK01000049
144655
Bacteroidota
GGC
Ala
>WENV182484101
OIRK01000443
338164
Bacteroidota
TTC
Glu
>WENV182484059
OIRK01000118
95875
Bacteroidota
TAG
Leu
>WENV182484207
OIRK01006629
338314
Bacteroidota
CCT
Arg
>WENV182484158
OIRK01001854
240012
Bacteroidota
CCC
Gly
>WENV182484052
OIRK01000052
44852
Bacteroidota
TAA
Leu
>WENV182484119
OIRK01000544
147439
Bacteroidota
TCT
Arg
>WENV182484139
OIRK01000783
411550
Bacteroidota
CTG
Gln
>WENV182484027
OIRK01000016
19528
Bacteroidota
GGA
Ser
>WENV182484019
OIRK01000009
132360
Bacteroidota
GGG
Pro
>WENV182484050
OIRK01000051
132360
Bacteroidota
GGG
Pro
>WENV182484103
OIRK01000449
425638
Bacteroidota
CTG
Gln
>WENV182484100
OIRK01000426
23696
Bacteroidota
GCT
Ser
>WENV182484012
OIRK01000004
16224
Bacteroidota
GGA
Ser
>WENV182484018
OIRK01000009
16220
Bacteroidota
GGA
Ser
>WENV182484006
OIRK01000001
338125
Bacteroidota
CCT
Arg
>WENV182484016
OIRK01000008
338125
Bacteroidota
CCT
Arg
>WENV182484164
OIRK01002244
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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