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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182484238
OIRL01000017
235097
Bacteroidota
TTT
Lys
>WENV182484225
OIRL01000002
235102
Bacteroidota
CGT
Thr
>WENV182484386
OIRL01003034
144657
Bacteroidota
CGG
Pro
>WENV182484378
OIRL01002398
338155
Bacteroidota
CTC
Glu
>WENV182484329
OIRL01000569
343138
Bacteroidota
CCT
Arg
>WENV182484401
OIRL01006525
58715
Bacteroidota
GAG
Leu
>WENV182484400
OIRL01006162
95618
Bacteroidota
TAG
Leu
>WENV182484330
OIRL01000571
338486
Bacteroidota
CAT
Met
>WENV182484402
OIRL01006589
411543
Bacteroidota
CTG
Gln
>WENV182484334
OIRL01000694
59689
Bacteroidota
CAG
Leu
>WENV182484236
OIRL01000013
436206
Bacteroidota
TTG
Gln
>WENV182484251
OIRL01000035
436206
Bacteroidota
TTG
Gln
>WENV182484382
OIRL01002665
235182
Bacteroidota
>WENV182484399
OIRL01006139
272983
Bacteroidota
CGT
Thr
>WENV182484232
OIRL01000010
338124
Bacteroidota
CCG
Arg
>WENV182484277
OIRL01000156
235203
Bacteroidota
TTT
Lys
>WENV182484352
OIRL01001049
235203
Bacteroidota
TTT
Lys
>WENV182484360
OIRL01001533
238121
Bacteroidota
CTT
Lys
>WENV182484240
OIRL01000018
338132
Bacteroidota
GCA
Cys
>WENV182484265
OIRL01000068
338132
Bacteroidota
GCA
Cys
>WENV182484354
OIRL01001168
338132
Bacteroidota
GCA
Cys
>WENV182484388
OIRL01003406
144688
Bacteroidota
CAT
Met
>WENV182484331
OIRL01000589
45423
Bacteroidota
TGA
Ser
>WENV182484320
OIRL01000472
58714
Bacteroidota
CAA
Leu
>WENV182484262
OIRL01000059
301449
Bacteroidota
CGG
Pro
>WENV182484227
OIRL01000006
141414
Bacteroidota
GGG
Pro
>WENV182484230
OIRL01000009
144656
Bacteroidota
GTG
His
>WENV182484247
OIRL01000025
235207
Bacteroidota
CAT
Met
>WENV182484245
OIRL01000024
144596
Bacteroidota
GGC
Ala
>WENV182484237
OIRL01000015
80607
Bacteroidota
GTA
Tyr
>WENV182484289
OIRL01000213
80614
Bacteroidota
>WENV182484259
OIRL01000051
144590
Bacteroidota
GTT
Asn
>WENV182484268
OIRL01000081
95559
Bacteroidota
TAG
Leu
>WENV182484243
OIRL01000022
144655
Bacteroidota
GGC
Ala
>WENV182484328
OIRL01000569
338164
Bacteroidota
TTC
Glu
>WENV182484313
OIRL01000377
95875
Bacteroidota
TAG
Leu
>WENV182484363
OIRL01001956
338314
Bacteroidota
CCT
Arg
>WENV182484379
OIRL01002411
240012
Bacteroidota
CCC
Gly
>WENV182484278
OIRL01000161
147439
Bacteroidota
TCT
Arg
>WENV182484341
OIRL01000818
411550
Bacteroidota
CTG
Gln
>WENV182484235
OIRL01000012
19528
Bacteroidota
GGA
Ser
>WENV182484353
OIRL01001123
425638
Bacteroidota
CTG
Gln
>WENV182484317
OIRL01000438
185921
Bacteroidota
GTC
Asp
>WENV182484377
OIRL01002398
23696
Bacteroidota
GCT
Ser
>WENV182484229
OIRL01000009
56823
Bacteroidota
TGA
Ser
>WENV182484290
OIRL01000234
56823
Bacteroidota
TGA
Ser
>WENV182484231
OIRL01000009
16224
Bacteroidota
GGA
Ser
>WENV182484250
OIRL01000031
16220
Bacteroidota
GGA
Ser
>WENV182484224
OIRL01000001
338125
Bacteroidota
CCT
Arg
>WENV182484371
OIRL01002150
338125
Bacteroidota
CCT
Arg
>WENV182484286
OIRL01000190
235129
Bacteroidota
GCC
Gly
>WENV182484390
OIRL01003592
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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