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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182486113
OIRR01003452
235347
Actinomycetota
GGC
Ala
>WENV182486059
OIRR01001908
144589
Actinomycetota
ACG
Arg
>WENV182486172
OIRR01007093
201717
Actinomycetota
CTT
Lys
>WENV182486208
OIRR01011097
144600
Actinomycetota
TGG
Pro
>WENV182486245
OIRR01018134
245301
Actinomycetota
GCC
Gly
>WENV182486233
OIRR01014770
411601
Actinomycetota
CCC
Gly
>WENV182486070
OIRR01002330
338239
Actinomycetota
TTC
Glu
>WENV182486084
OIRR01002685
16219
Actinomycetota
GCT
Ser
>WENV182485964
OIRR01000201
235174
Actinomycetota
TGC
Ala
>WENV182486007
OIRR01000667
235101
Actinomycetota
TTT
Lys
>WENV182486215
OIRR01012877
121510
Actinomycetota
TAA
Leu
>WENV182486177
OIRR01007801
145423
Actinomycetota
TCT
Arg
>WENV182486129
OIRR01004199
44855
Actinomycetota
TGA
Ser
>WENV182486075
OIRR01002422
235199
Actinomycetota
CAC
Val
>WENV182486045
OIRR01001616
44862
Actinomycetota
CGA
Ser
>WENV182486136
OIRR01004519
413665
Actinomycetota
TTG
Gln
>WENV182485975
OIRR01000311
254857
Actinomycetota
CCG
Arg
>WENV182486033
OIRR01001157
144700
Actinomycetota
CAT
Met
>WENV182486028
OIRR01001063
44942
Actinomycetota
TGA
Ser
>WENV182486132
OIRR01004249
238473
Actinomycetota
GTG
His
>WENV182486310
OIRR01033635
144636
Actinomycetota
GAT
Ile
>WENV182486047
OIRR01001644
295695
Actinomycetota
CTC
Glu
>WENV182486048
OIRR01001644
338148
Actinomycetota
CTG
Gln
>WENV182486083
OIRR01002613
144825
Actinomycetota
CAT
Met
>WENV182486014
OIRR01000794
145347
Actinomycetota
CAA
Leu
>WENV182486017
OIRR01000867
235348
Actinomycetota
CCT
Arg
>WENV182486027
OIRR01001057
411554
Actinomycetota
CCC
Gly
>WENV182485980
OIRR01000368
113601
Actinomycetota
TAG
Leu
>WENV182486190
OIRR01009196
144595
Actinomycetota
CAA
Leu
>WENV182486158
OIRR01005804
145343
Actinomycetota
GGG
Pro
>WENV182486218
OIRR01013374
235149
Actinomycetota
CCT
Arg
>WENV182486021
OIRR01000904
145269
Actinomycetota
CAT
Met
>WENV182485979
OIRR01000368
235121
Actinomycetota
CGT
Thr
>WENV182486081
OIRR01002514
144635
Actinomycetota
TGG
Pro
>WENV182486068
OIRR01002269
119485
Actinomycetota
TAA
Leu
>WENV182486134
OIRR01004309
80622
Actinomycetota
CAG
Leu
>WENV182486141
OIRR01004684
235173
Actinomycetota
GGC
Ala
>WENV182485978
OIRR01000356
95593
Actinomycetota
>WENV182486051
OIRR01001699
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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