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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182487998
OIRY01000364
196621
Bacillota
GTC
Asp
>WENV182487983
OIRY01000205
309417
Bacillota
GGC
Ala
>WENV182487963
OIRY01000067
144612
Bacillota
TCT
Arg
>WENV182488012
OIRY01000667
235098
Bacillota
GAC
Val
>WENV182488088
OIRY01009087
338152
Bacillota
TTC
Glu
>WENV182487955
OIRY01000045
44854
Bacillota
TGA
Ser
>WENV182488093
OIRY01009615
144577
Bacillota
GAT
Ile
>WENV182487984
OIRY01000210
304022
Bacillota
GCC
Gly
>WENV182488029
OIRY01001139
304022
Bacillota
GCC
Gly
>WENV182488035
OIRY01001432
235294
Bacillota
TGC
Ala
>WENV182488013
OIRY01000701
11034
Bacillota
GGA
Ser
>WENV182488092
OIRY01009615
235087
Bacillota
TGC
Ala
>WENV182487941
OIRY01000006
338149
Bacillota
CTC
Glu
>WENV182487985
OIRY01000226
411547
Bacillota
CTG
Gln
>WENV182487956
OIRY01000045
4624
Bacillota
GCT
Ser
>WENV182487999
OIRY01000364
235095
Bacillota
GGT
Thr
>WENV182488019
OIRY01000763
235095
Bacillota
GGT
Thr
>WENV182488002
OIRY01000443
411549
Bacillota
TTG
Gln
>WENV182488027
OIRY01001116
148188
Bacillota
CCG
Arg
>WENV182488026
OIRY01001098
80612
Bacillota
GTA
Tyr
>WENV182488115
OIRY01013694
235127
Bacillota
TTT
Lys
>WENV182488010
OIRY01000583
235124
Bacillota
TGG
Pro
>WENV182487980
OIRY01000170
338129
Bacillota
TGT
Thr
>WENV182487967
OIRY01000081
144583
Bacillota
ACG
Arg
>WENV182487997
OIRY01000364
235171
Bacillota
CCA
Trp
>WENV182487942
OIRY01000006
144621
Bacillota
GTT
Asn
>WENV182488036
OIRY01001457
144621
Bacillota
GTT
Asn
>WENV182487960
OIRY01000061
58712
Bacillota
CAG
Leu
>WENV182488037
OIRY01001460
245296
Bacillota
CCC
Gly
>WENV182488049
OIRY01002700
272992
Bacillota
CTT
Lys
>WENV182488098
OIRY01009919
344240
Bacillota
GCC
Gly
>WENV182488009
OIRY01000526
144594
Bacillota
CAC
Val
>WENV182487970
OIRY01000109
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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