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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182490472
OISG01000038
235097
Bacteroidota
TTT
Lys
>WENV182490479
OISG01000046
235097
Bacteroidota
TTT
Lys
>WENV182490506
OISG01000162
235102
Bacteroidota
CGT
Thr
>WENV182490483
OISG01000059
338155
Bacteroidota
CTC
Glu
>WENV182490515
OISG01000213
95618
Bacteroidota
TAG
Leu
>WENV182490471
OISG01000033
411543
Bacteroidota
CTG
Gln
>WENV182490465
OISG01000018
436206
Bacteroidota
TTG
Gln
>WENV182490493
OISG01000086
235182
Bacteroidota
>WENV182490495
OISG01000101
272983
Bacteroidota
CGT
Thr
>WENV182490467
OISG01000023
338124
Bacteroidota
CCG
Arg
>WENV182490492
OISG01000084
338132
Bacteroidota
GCA
Cys
>WENV182490502
OISG01000136
338132
Bacteroidota
GCA
Cys
>WENV182490498
OISG01000123
144688
Bacteroidota
CAT
Met
>WENV182490484
OISG01000062
181746
Bacteroidota
GGC
Ala
>WENV182490478
OISG01000045
301449
Bacteroidota
CGG
Pro
>WENV182490509
OISG01000174
144933
Bacteroidota
TCT
Arg
>WENV182490488
OISG01000076
144656
Bacteroidota
GTG
His
>WENV182490460
OISG01000009
235207
Bacteroidota
CAT
Met
>WENV182490505
OISG01000160
80607
Bacteroidota
GTA
Tyr
>WENV182490487
OISG01000076
52358
Bacteroidota
TGA
Ser
>WENV182490521
OISG01000380
52358
Bacteroidota
TGA
Ser
>WENV182490480
OISG01000055
144590
Bacteroidota
GTT
Asn
>WENV182490491
OISG01000083
95559
Bacteroidota
TAG
Leu
>WENV182490489
OISG01000078
419272
Bacteroidota
CTG
Gln
>WENV182490525
OISG01000439
144655
Bacteroidota
GGC
Ala
>WENV182490490
OISG01000080
338314
Bacteroidota
CCT
Arg
>WENV182490453
OISG01000002
139743
Bacteroidota
GGG
Pro
>WENV182490456
OISG01000004
19317
Bacteroidota
GGA
Ser
>WENV182490485
OISG01000073
16224
Bacteroidota
GGA
Ser
>WENV182490501
OISG01000131
16220
Bacteroidota
GGA
Ser
>WENV182490476
OISG01000043
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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