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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182495519
OITB01000041
196621
Bacillota
GTC
Asp
>WENV182495564
OITB01000147
196621
Bacillota
GTC
Asp
>WENV182495638
OITB01001020
16842
Bacillota
CGA
Ser
>WENV182495607
OITB01000329
309417
Bacillota
GGC
Ala
>WENV182495532
OITB01000057
144612
Bacillota
TCT
Arg
>WENV182495585
OITB01000194
235098
Bacillota
GAC
Val
>WENV182495556
OITB01000123
44854
Bacillota
TGA
Ser
>WENV182495517
OITB01000041
304022
Bacillota
GCC
Gly
>WENV182495520
OITB01000041
304022
Bacillota
GCC
Gly
>WENV182495662
OITB01002453
391536
Bacillota
TTC
Glu
>WENV182495673
OITB01003509
10926
Bacillota
CGA
Ser
>WENV182495648
OITB01001721
16834
Bacillota
GCT
Ser
>WENV182495522
OITB01000041
11034
Bacillota
GGA
Ser
>WENV182495518
OITB01000041
235117
Bacillota
TAC
Val
>WENV182495661
OITB01002453
243646
Bacillota
GTT
Asn
>WENV182495697
OITB01006690
37437
Bacillota
TAA
Leu
>WENV182495632
OITB01000796
235079
Bacillota
GAA
Phe
>WENV182495663
OITB01002453
243612
Bacillota
TAC
Val
>WENV182495553
OITB01000116
338149
Bacillota
CTC
Glu
>WENV182495536
OITB01000059
245298
Bacillota
CGG
Pro
>WENV182495687
OITB01005930
147135
Bacillota
ACG
Arg
>WENV182495535
OITB01000059
411547
Bacillota
CTG
Gln
>WENV182495577
OITB01000164
411547
Bacillota
CTG
Gln
>WENV182495557
OITB01000123
4624
Bacillota
GCT
Ser
>WENV182495690
OITB01006301
313164
Bacillota
TTT
Lys
>WENV182495503
OITB01000020
235095
Bacillota
GGT
Thr
>WENV182495565
OITB01000147
235095
Bacillota
GGT
Thr
>WENV182495656
OITB01001922
250349
Bacillota
GAA
Phe
>WENV182495534
OITB01000059
411549
Bacillota
TTG
Gln
>WENV182495559
OITB01000133
148188
Bacillota
CCG
Arg
>WENV182495612
OITB01000413
80612
Bacillota
GTA
Tyr
>WENV182495655
OITB01001922
235197
Bacillota
GTC
Asp
>WENV182495695
OITB01006690
368876
Bacillota
GCC
Gly
>WENV182495693
OITB01006531
147674
Bacillota
TCT
Arg
>WENV182495605
OITB01000318
235124
Bacillota
TGG
Pro
>WENV182495587
OITB01000212
338129
Bacillota
TGT
Thr
>WENV182495674
OITB01003636
243613
Bacillota
GTG
His
>WENV182495611
OITB01000411
144583
Bacillota
ACG
Arg
>WENV182495563
OITB01000147
235171
Bacillota
CCA
Trp
>WENV182495554
OITB01000116
144621
Bacillota
GTT
Asn
>WENV182495625
OITB01000566
144621
Bacillota
GTT
Asn
>WENV182495711
OITB01009880
238747
Bacillota
GTG
His
>WENV182495701
OITB01006793
152491
Bacillota
CAT
Met
>WENV182495504
OITB01000020
58712
Bacillota
CAG
Leu
>WENV182495591
OITB01000220
245296
Bacillota
CCC
Gly
>WENV182495646
OITB01001494
272992
Bacillota
CTT
Lys
>WENV182495700
OITB01006793
281472
Bacillota
GGT
Thr
>WENV182495669
OITB01003011
178024
Bacillota
TCT
Arg
>WENV182495590
OITB01000217
144594
Bacillota
CAC
Val
>WENV182495665
OITB01002709
413657
Bacillota
CCC
Gly
>WENV182495675
OITB01003636
343027
Bacillota
TTG
Gln
>WENV182495616
OITB01000452
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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