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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182497169
OITK01000007
235097
Bacteroidota
TTT
Lys
>WENV182497296
OITK01000855
235102
Bacteroidota
CGT
Thr
>WENV182497294
OITK01000852
144657
Bacteroidota
CGG
Pro
>WENV182497164
OITK01000003
338155
Bacteroidota
CTC
Glu
>WENV182497311
OITK01001561
343138
Bacteroidota
CCT
Arg
>WENV182497318
OITK01001925
58715
Bacteroidota
GAG
Leu
>WENV182497341
OITK01004335
95618
Bacteroidota
TAG
Leu
>WENV182497302
OITK01000991
338486
Bacteroidota
CAT
Met
>WENV182497162
OITK01000002
415410
Bacteroidota
TTG
Gln
>WENV182497196
OITK01000058
415410
Bacteroidota
TTG
Gln
>WENV182497353
OITK01005293
411543
Bacteroidota
CTG
Gln
>WENV182497292
OITK01000678
59689
Bacteroidota
CAG
Leu
>WENV182497317
OITK01001925
59689
Bacteroidota
CAG
Leu
>WENV182497322
OITK01002421
272983
Bacteroidota
CGT
Thr
>WENV182497211
OITK01000116
338124
Bacteroidota
CCG
Arg
>WENV182497348
OITK01004904
235203
Bacteroidota
TTT
Lys
>WENV182497357
OITK01006036
235203
Bacteroidota
TTT
Lys
>WENV182497366
OITK01007145
238121
Bacteroidota
CTT
Lys
>WENV182497183
OITK01000032
338132
Bacteroidota
GCA
Cys
>WENV182497305
OITK01001190
144688
Bacteroidota
CAT
Met
>WENV182497354
OITK01005523
45423
Bacteroidota
TGA
Ser
>WENV182497335
OITK01003880
58714
Bacteroidota
CAA
Leu
>WENV182497207
OITK01000097
144656
Bacteroidota
GTG
His
>WENV182497188
OITK01000034
235207
Bacteroidota
CAT
Met
>WENV182497337
OITK01004243
144659
Bacteroidota
GTG
His
>WENV182497295
OITK01000852
235180
Bacteroidota
CCA
Trp
>WENV182497171
OITK01000008
144596
Bacteroidota
GGC
Ala
>WENV182497237
OITK01000159
80607
Bacteroidota
GTA
Tyr
>WENV182497293
OITK01000701
80614
Bacteroidota
>WENV182497176
OITK01000023
95559
Bacteroidota
TAG
Leu
>WENV182497167
OITK01000006
419272
Bacteroidota
CTG
Gln
>WENV182497190
OITK01000038
144655
Bacteroidota
GGC
Ala
>WENV182497332
OITK01003570
338164
Bacteroidota
TTC
Glu
>WENV182497362
OITK01006494
95875
Bacteroidota
TAG
Leu
>WENV182497363
OITK01006683
338314
Bacteroidota
CCT
Arg
>WENV182497187
OITK01000033
44852
Bacteroidota
TAA
Leu
>WENV182497336
OITK01003946
147439
Bacteroidota
TCT
Arg
>WENV182497320
OITK01002086
411550
Bacteroidota
CTG
Gln
>WENV182497321
OITK01002086
411550
Bacteroidota
CTG
Gln
>WENV182497215
OITK01000119
50727
Bacteroidota
TGA
Ser
>WENV182497250
OITK01000244
50727
Bacteroidota
TGA
Ser
>WENV182497326
OITK01002656
50727
Bacteroidota
TGA
Ser
>WENV182497166
OITK01000006
132360
Bacteroidota
GGG
Pro
>WENV182497202
OITK01000083
132360
Bacteroidota
GGG
Pro
>WENV182497313
OITK01001722
132360
Bacteroidota
GGG
Pro
>WENV182497163
OITK01000003
23696
Bacteroidota
GCT
Ser
>WENV182497208
OITK01000097
16224
Bacteroidota
GGA
Ser
>WENV182497168
OITK01000006
16220
Bacteroidota
GGA
Ser
>WENV182497179
OITK01000028
338125
Bacteroidota
CCT
Arg
>WENV182497189
OITK01000036
338125
Bacteroidota
CCT
Arg
>WENV182497316
OITK01001925
235129
Bacteroidota
GCC
Gly
>WENV182497325
OITK01002512
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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