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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182500376
OITY01002651
243025
Bacteroidota
CAT
Met
>WENV182500456
OITY01008035
343138
Bacteroidota
CCT
Arg
>WENV182500423
OITY01005086
436206
Bacteroidota
TTG
Gln
>WENV182500476
OITY01010772
338132
Bacteroidota
GCA
Cys
>WENV182500296
OITY01000681
301449
Bacteroidota
CGG
Pro
>WENV182500418
OITY01004790
144933
Bacteroidota
TCT
Arg
>WENV182500463
OITY01008933
141414
Bacteroidota
GGG
Pro
>WENV182500481
OITY01011620
80607
Bacteroidota
GTA
Tyr
>WENV182500477
OITY01011027
154643
Bacteroidota
CAT
Met
>WENV182500479
OITY01011192
144655
Bacteroidota
GGC
Ala
>WENV182500409
OITY01003964
338165
Bacteroidota
GGT
Thr
>WENV182500395
OITY01003470
425638
Bacteroidota
CTG
Gln
>WENV182500393
OITY01003451
353927
Bacteroidota
TTC
Glu
>WENV182500425
OITY01005421
414426
Bacteroidota
CTG
Gln
>WENV182500355
OITY01001658
56823
Bacteroidota
TGA
Ser
>WENV182500433
OITY01006250
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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