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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182501253
OIUB01003187
95618
Bacteroidota
TAG
Leu
>WENV182501233
OIUB01001356
235182
Bacteroidota
>WENV182501237
OIUB01002300
272983
Bacteroidota
CGT
Thr
>WENV182501213
OIUB01000603
338132
Bacteroidota
GCA
Cys
>WENV182501189
OIUB01000050
144688
Bacteroidota
CAT
Met
>WENV182501201
OIUB01000228
181746
Bacteroidota
GGC
Ala
>WENV182501248
OIUB01002823
144933
Bacteroidota
TCT
Arg
>WENV182501220
OIUB01000864
235207
Bacteroidota
CAT
Met
>WENV182501226
OIUB01001154
80607
Bacteroidota
GTA
Tyr
>WENV182501188
OIUB01000025
338314
Bacteroidota
CCT
Arg
>WENV182501227
OIUB01001154
338165
Bacteroidota
GGT
Thr
>WENV182501215
OIUB01000709
50727
Bacteroidota
TGA
Ser
>WENV182501232
OIUB01001327
132360
Bacteroidota
GGG
Pro
>WENV182501235
OIUB01001940
19317
Bacteroidota
GGA
Ser
>WENV182501209
OIUB01000312
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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