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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182502167
OIUH01003102
243647
Bacillota
TTT
Lys
>WENV182501987
OIUH01000009
196621
Bacillota
GTC
Asp
>WENV182502036
OIUH01000069
196621
Bacillota
GTC
Asp
>WENV182502139
OIUH01001476
16842
Bacillota
CGA
Ser
>WENV182501982
OIUH01000005
309417
Bacillota
GGC
Ala
>WENV182502153
OIUH01001869
37213
Bacillota
TGA
Ser
>WENV182502087
OIUH01000211
144612
Bacillota
TCT
Arg
>WENV182502081
OIUH01000178
235098
Bacillota
GAC
Val
>WENV182502098
OIUH01000338
23769
Bacillota
TAA
Leu
>WENV182502002
OIUH01000026
44854
Bacillota
TGA
Ser
>WENV182501985
OIUH01000009
304022
Bacillota
GCC
Gly
>WENV182501989
OIUH01000009
304022
Bacillota
GCC
Gly
>WENV182502007
OIUH01000029
304022
Bacillota
GCC
Gly
>WENV182502008
OIUH01000029
304022
Bacillota
GCC
Gly
>WENV182502103
OIUH01000368
307003
Bacillota
TGC
Ala
>WENV182502146
OIUH01001609
391536
Bacillota
TTC
Glu
>WENV182502132
OIUH01001109
340802
Bacillota
TTG
Gln
>WENV182502118
OIUH01000670
144668
Bacillota
GTC
Asp
>WENV182502171
OIUH01003879
429429
Bacillota
CCA
Trp
>WENV182502138
OIUH01001448
16834
Bacillota
GCT
Ser
>WENV182502005
OIUH01000029
11034
Bacillota
GGA
Ser
>WENV182501986
OIUH01000009
235117
Bacillota
TAC
Val
>WENV182502163
OIUH01003059
114002
Bacillota
CAA
Leu
>WENV182501988
OIUH01000009
235079
Bacillota
GAA
Phe
>WENV182502006
OIUH01000029
235079
Bacillota
GAA
Phe
>WENV182502147
OIUH01001609
243612
Bacillota
TAC
Val
>WENV182501999
OIUH01000026
338149
Bacillota
CTC
Glu
>WENV182502056
OIUH01000094
245298
Bacillota
CGG
Pro
>WENV182502183
OIUH01004857
147135
Bacillota
ACG
Arg
>WENV182501973
OIUH01000001
411547
Bacillota
CTG
Gln
>WENV182502055
OIUH01000094
411547
Bacillota
CTG
Gln
>WENV182502003
OIUH01000026
4624
Bacillota
GCT
Ser
>WENV182502133
OIUH01001109
313164
Bacillota
TTT
Lys
>WENV182502034
OIUH01000069
235095
Bacillota
GGT
Thr
>WENV182502037
OIUH01000069
235095
Bacillota
GGT
Thr
>WENV182502129
OIUH01001109
194150
Bacillota
TGG
Pro
>WENV182501983
OIUH01000005
411549
Bacillota
TTG
Gln
>WENV182502012
OIUH01000034
148188
Bacillota
CCG
Arg
>WENV182502137
OIUH01001317
80612
Bacillota
GTA
Tyr
>WENV182502142
OIUH01001609
235197
Bacillota
GTC
Asp
>WENV182502144
OIUH01001609
368876
Bacillota
GCC
Gly
>WENV182502057
OIUH01000094
235124
Bacillota
TGG
Pro
>WENV182502079
OIUH01000170
144583
Bacillota
ACG
Arg
>WENV182502035
OIUH01000069
235171
Bacillota
CCA
Trp
>WENV182501992
OIUH01000012
144621
Bacillota
GTT
Asn
>WENV182502000
OIUH01000026
144621
Bacillota
GTT
Asn
>WENV182502071
OIUH01000138
58712
Bacillota
CAG
Leu
>WENV182501990
OIUH01000009
245296
Bacillota
CCC
Gly
>WENV182502178
OIUH01004323
273029
Bacillota
TGT
Thr
>WENV182502029
OIUH01000058
144594
Bacillota
CAC
Val
>WENV182502151
OIUH01001746
413657
Bacillota
CCC
Gly
>WENV182502145
OIUH01001609
287034
Bacillota
GTT
Asn
>WENV182502166
OIUH01003102
343027
Bacillota
TTG
Gln
>WENV182502014
OIUH01000034
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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