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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182507083
OIVJ01001371
196621
Bacillota
GTC
Asp
>WENV182507126
OIVJ01006421
155113
Bacillota
CGG
Pro
>WENV182507118
OIVJ01005516
144612
Bacillota
TCT
Arg
>WENV182507166
OIVJ01012828
235098
Bacillota
GAC
Val
>WENV182507133
OIVJ01007878
338152
Bacillota
TTC
Glu
>WENV182507052
OIVJ01000271
44854
Bacillota
TGA
Ser
>WENV182507124
OIVJ01006075
235137
Bacillota
TGC
Ala
>WENV182507066
OIVJ01000584
11034
Bacillota
GGA
Ser
>WENV182507151
OIVJ01010028
247057
Bacillota
TGC
Ala
>WENV182507138
OIVJ01008597
274189
Bacillota
TGT
Thr
>WENV182507081
OIVJ01001198
235079
Bacillota
GAA
Phe
>WENV182507059
OIVJ01000463
235087
Bacillota
TGC
Ala
>WENV182507075
OIVJ01000800
338149
Bacillota
CTC
Glu
>WENV182507132
OIVJ01007878
287000
Bacillota
GTT
Asn
>WENV182507105
OIVJ01004194
413152
Bacillota
TCC
Gly
>WENV182507117
OIVJ01005515
153911
Bacillota
GAT
Ile
>WENV182507085
OIVJ01001538
411547
Bacillota
CTG
Gln
>WENV182507053
OIVJ01000271
4624
Bacillota
GCT
Ser
>WENV182507084
OIVJ01001371
235095
Bacillota
GGT
Thr
>WENV182507078
OIVJ01000862
411549
Bacillota
TTG
Gln
>WENV182507050
OIVJ01000244
148188
Bacillota
CCG
Arg
>WENV182507056
OIVJ01000424
80612
Bacillota
GTA
Tyr
>WENV182507074
OIVJ01000765
235124
Bacillota
TGG
Pro
>WENV182507104
OIVJ01004162
338129
Bacillota
TGT
Thr
>WENV182507100
OIVJ01003527
144583
Bacillota
ACG
Arg
>WENV182507144
OIVJ01009543
144672
Bacillota
TCT
Arg
>WENV182507082
OIVJ01001371
235171
Bacillota
CCA
Trp
>WENV182507048
OIVJ01000215
144621
Bacillota
GTT
Asn
>WENV182507076
OIVJ01000800
144621
Bacillota
GTT
Asn
>WENV182507046
OIVJ01000198
58712
Bacillota
CAG
Leu
>WENV182507141
OIVJ01008713
245296
Bacillota
CCC
Gly
>WENV182507047
OIVJ01000209
144594
Bacillota
CAC
Val
>WENV182507140
OIVJ01008597
272488
Bacillota
GAA
Phe
>WENV182507044
OIVJ01000148
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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