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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182507014
OIVJ01000004
235097
Bacteroidota
TTT
Lys
>WENV182507031
OIVJ01000049
235102
Bacteroidota
CGT
Thr
>WENV182507015
OIVJ01000005
415410
Bacteroidota
TTG
Gln
>WENV182507018
OIVJ01000009
338124
Bacteroidota
CCG
Arg
>WENV182507036
OIVJ01000061
338132
Bacteroidota
GCA
Cys
>WENV182507034
OIVJ01000060
193809
Bacteroidota
CAT
Met
>WENV182507125
OIVJ01006359
144933
Bacteroidota
TCT
Arg
>WENV182507042
OIVJ01000110
144656
Bacteroidota
GTG
His
>WENV182507025
OIVJ01000026
235207
Bacteroidota
CAT
Met
>WENV182507096
OIVJ01002549
80607
Bacteroidota
GTA
Tyr
>WENV182507054
OIVJ01000303
16999
Bacteroidota
GGA
Ser
>WENV182507019
OIVJ01000011
52358
Bacteroidota
TGA
Ser
>WENV182507045
OIVJ01000197
52358
Bacteroidota
TGA
Ser
>WENV182507026
OIVJ01000030
95559
Bacteroidota
TAG
Leu
>WENV182507011
OIVJ01000001
419272
Bacteroidota
CTG
Gln
>WENV182507024
OIVJ01000025
144655
Bacteroidota
GGC
Ala
>WENV182507028
OIVJ01000033
44852
Bacteroidota
TAA
Leu
>WENV182507010
OIVJ01000001
132360
Bacteroidota
GGG
Pro
>WENV182507067
OIVJ01000587
425638
Bacteroidota
CTG
Gln
>WENV182507037
OIVJ01000064
16224
Bacteroidota
GGA
Ser
>WENV182507033
OIVJ01000055
16220
Bacteroidota
GGA
Ser
>WENV182507013
OIVJ01000003
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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