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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182544043
OJBE01000061
80917
Alphaproteobacteria
CAG
Leu
>WENV182544066
OJBE01000165
267922
Alphaproteobacteria
CCA
Trp
>WENV182544137
OJBE01002043
241021
Alphaproteobacteria
GGC
Ala
>WENV182544087
OJBE01000265
113700
Alphaproteobacteria
>WENV182544129
OJBE01001279
23671
Alphaproteobacteria
CGA
Ser
>WENV182544053
OJBE01000097
339723
Alphaproteobacteria
>WENV182544172
OJBE01003149
147083
Alphaproteobacteria
GGG
Pro
>WENV182544050
OJBE01000083
339722
Alphaproteobacteria
TTG
Gln
>WENV182544084
OJBE01000231
80918
Alphaproteobacteria
GAG
Leu
>WENV182544205
OJBE01006697
147334
Alphaproteobacteria
CAT
Met
>WENV182544070
OJBE01000173
157999
Alphaproteobacteria
TCT
Arg
>WENV182544060
OJBE01000137
113716
Alphaproteobacteria
CAA
Leu
>WENV182544116
OJBE01000796
412279
Alphaproteobacteria
CCC
Gly
>WENV182544222
OJBE01011415
147287
Alphaproteobacteria
TGG
Pro
>WENV182544099
OJBE01000384
28682
Alphaproteobacteria
GGA
Ser
>WENV182544122
OJBE01001003
252148
Alphaproteobacteria
TGT
Thr
>WENV182544044
OJBE01000066
23672
Alphaproteobacteria
GCT
Ser
>WENV182544095
OJBE01000324
412477
Alphaproteobacteria
GCA
Cys
>WENV182544107
OJBE01000552
147283
Alphaproteobacteria
GTG
His
>WENV182544081
OJBE01000222
338288
Alphaproteobacteria
TTC
Glu
>WENV182544082
OJBE01000222
338288
Alphaproteobacteria
TTC
Glu
>WENV182544194
OJBE01005016
349650
Alphaproteobacteria
CAC
Val
>WENV182544208
OJBE01007121
339609
Alphaproteobacteria
GGT
Thr
>WENV182544133
OJBE01001423
113715
Alphaproteobacteria
TAG
Leu
>WENV182544086
OJBE01000253
236256
Alphaproteobacteria
TAC
Val
>WENV182544068
OJBE01000169
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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