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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182547164
OJBR01003675
80917
Alphaproteobacteria
CAG
Leu
>WENV182547163
OJBR01003497
241021
Alphaproteobacteria
GGC
Ala
>WENV182547136
OJBR01002038
113700
Alphaproteobacteria
>WENV182547196
OJBR01009344
23671
Alphaproteobacteria
CGA
Ser
>WENV182547130
OJBR01001821
339723
Alphaproteobacteria
>WENV182547119
OJBR01001491
147083
Alphaproteobacteria
GGG
Pro
>WENV182547145
OJBR01002390
148157
Alphaproteobacteria
CCG
Arg
>WENV182547167
OJBR01003951
339722
Alphaproteobacteria
TTG
Gln
>WENV182547170
OJBR01004402
80918
Alphaproteobacteria
GAG
Leu
>WENV182547165
OJBR01003889
147334
Alphaproteobacteria
CAT
Met
>WENV182547138
OJBR01002070
157999
Alphaproteobacteria
TCT
Arg
>WENV182547133
OJBR01001945
113716
Alphaproteobacteria
CAA
Leu
>WENV182547192
OJBR01008210
412279
Alphaproteobacteria
CCC
Gly
>WENV182547142
OJBR01002267
23672
Alphaproteobacteria
GCT
Ser
>WENV182547140
OJBR01002138
412477
Alphaproteobacteria
GCA
Cys
>WENV182547111
OJBR01001314
338760
Alphaproteobacteria
GAA
Phe
>WENV182547134
OJBR01001980
344517
Alphaproteobacteria
GTT
Asn
>WENV182547121
OJBR01001500
147283
Alphaproteobacteria
GTG
His
>WENV182547131
OJBR01001838
338288
Alphaproteobacteria
TTC
Glu
>WENV182547114
OJBR01001404
339609
Alphaproteobacteria
GGT
Thr
>WENV182547139
OJBR01002094
113715
Alphaproteobacteria
TAG
Leu
>WENV182547184
OJBR01006252
236256
Alphaproteobacteria
TAC
Val
>WENV182547146
OJBR01002398
147286
Alphaproteobacteria
CGG
Pro
>WENV182547109
OJBR01001168
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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