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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182551878
OJCJ01000590
113700
Alphaproteobacteria
>WENV182552237
OJCJ01015566
338282
Alphaproteobacteria
GTT
Asn
>WENV182552317
OJCJ01027739
339846
Alphaproteobacteria
GAC
Val
>WENV182552270
OJCJ01019214
147879
Alphaproteobacteria
TGG
Pro
>WENV182552284
OJCJ01021467
249928
Alphaproteobacteria
TAC
Val
>WENV182552083
OJCJ01005706
61017
Alphaproteobacteria
CAG
Leu
>WENV182552023
OJCJ01003464
341164
Alphaproteobacteria
GCC
Gly
>WENV182551805
OJCJ01000055
344517
Alphaproteobacteria
GTT
Asn
>WENV182552310
OJCJ01026342
147283
Alphaproteobacteria
GTG
His
>WENV182552362
OJCJ01037243
338287
Alphaproteobacteria
GGT
Thr
>WENV182552037
OJCJ01003880
154227
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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