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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182554264
OJCU01000269
245770
Gammaproteobacteria
TTT
Lys
>WENV182554275
OJCU01000363
248041
Gammaproteobacteria
GGC
Ala
>WENV182554379
OJCU01002567
239650
Gammaproteobacteria
TGT
Thr
>WENV182554426
OJCU01004540
238307
Gammaproteobacteria
GAA
Phe
>WENV182554407
OJCU01003404
411842
Gammaproteobacteria
GCA
Cys
>WENV182554364
OJCU01002451
243485
Gammaproteobacteria
TGT
Thr
>WENV182554457
OJCU01006932
149661
Gammaproteobacteria
CAT
Met
>WENV182554285
OJCU01000553
240536
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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