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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182563170
OJEB01001301
113700
Alphaproteobacteria
>WENV182563088
OJEB01000116
109657
Alphaproteobacteria
TAG
Leu
>WENV182563059
OJEB01000026
176908
Alphaproteobacteria
GTC
Asp
>WENV182563080
OJEB01000101
28682
Alphaproteobacteria
GGA
Ser
>WENV182563338
OJEB01010520
23672
Alphaproteobacteria
GCT
Ser
>WENV182563376
OJEB01017603
340106
Alphaproteobacteria
GCC
Gly
>WENV182563389
OJEB01020233
161002
Alphaproteobacteria
GTG
His
>WENV182563116
OJEB01000357
344517
Alphaproteobacteria
GTT
Asn
>WENV182563246
OJEB01003262
319925
Alphaproteobacteria
TGT
Thr
>WENV182563066
OJEB01000066
154227
Alphaproteobacteria
CAT
Met
>WENV182563325
OJEB01008429
343498
Alphaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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