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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182564933
OJEF01016635
241021
Alphaproteobacteria
GGC
Ala
>WENV182564707
OJEF01003807
113700
Alphaproteobacteria
>WENV182564908
OJEF01014275
338282
Alphaproteobacteria
GTT
Asn
>WENV182564896
OJEF01013111
147083
Alphaproteobacteria
GGG
Pro
>WENV182565046
OJEF01035726
175748
Alphaproteobacteria
CAT
Met
>WENV182564891
OJEF01012796
252148
Alphaproteobacteria
TGT
Thr
>WENV182564947
OJEF01018770
338760
Alphaproteobacteria
GAA
Phe
>WENV182565068
OJEF01044574
344517
Alphaproteobacteria
GTT
Asn
>WENV182564844
OJEF01009922
147283
Alphaproteobacteria
GTG
His
>WENV182564838
OJEF01009723
412424
Alphaproteobacteria
TCC
Gly
>WENV182564955
OJEF01020144
236256
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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