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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182589008
OJHY01008305
241021
Alphaproteobacteria
GGC
Ala
>WENV182589054
OJHY01014544
113700
Alphaproteobacteria
>WENV182589068
OJHY01018228
147083
Alphaproteobacteria
GGG
Pro
>WENV182589082
OJHY01022293
150172
Alphaproteobacteria
ACG
Arg
>WENV182589083
OJHY01022751
151733
Alphaproteobacteria
GGG
Pro
>WENV182589091
OJHY01023866
23672
Alphaproteobacteria
GCT
Ser
>WENV182589029
OJHY01010736
159427
Alphaproteobacteria
GTG
His
>WENV182589052
OJHY01014134
341164
Alphaproteobacteria
GCC
Gly
>WENV182589005
OJHY01008103
59164
Alphaproteobacteria
GAG
Leu
>WENV182589047
OJHY01013484
348781
Alphaproteobacteria
GAA
Phe
>WENV182589113
OJHY01032705
147283
Alphaproteobacteria
GTG
His
>WENV182589099
OJHY01027364
413302
Alphaproteobacteria
CCC
Gly
>WENV182589030
OJHY01010860
113715
Alphaproteobacteria
TAG
Leu
>WENV182589036
OJHY01011474
236256
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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