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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182597607
OJJB01003298
235097
Bacteroidota
TTT
Lys
>WENV182597369
OJJB01000002
338155
Bacteroidota
CTC
Glu
>WENV182597670
OJJB01011451
338155
Bacteroidota
CTC
Glu
>WENV182597377
OJJB01000004
95618
Bacteroidota
TAG
Leu
>WENV182597383
OJJB01000005
411543
Bacteroidota
CTG
Gln
>WENV182597598
OJJB01002777
436206
Bacteroidota
TTG
Gln
>WENV182597604
OJJB01003182
436206
Bacteroidota
TTG
Gln
>WENV182597427
OJJB01000025
235182
Bacteroidota
>WENV182597465
OJJB01000064
272983
Bacteroidota
CGT
Thr
>WENV182597588
OJJB01001568
338124
Bacteroidota
CCG
Arg
>WENV182597384
OJJB01000006
338132
Bacteroidota
GCA
Cys
>WENV182597521
OJJB01000377
338132
Bacteroidota
GCA
Cys
>WENV182597442
OJJB01000037
144688
Bacteroidota
CAT
Met
>WENV182597375
OJJB01000003
181746
Bacteroidota
GGC
Ala
>WENV182597376
OJJB01000004
301449
Bacteroidota
CGG
Pro
>WENV182597539
OJJB01000454
301449
Bacteroidota
CGG
Pro
>WENV182597648
OJJB01008694
301449
Bacteroidota
CGG
Pro
>WENV182597371
OJJB01000002
144933
Bacteroidota
TCT
Arg
>WENV182597600
OJJB01002795
144933
Bacteroidota
TCT
Arg
>WENV182597381
OJJB01000005
141414
Bacteroidota
GGG
Pro
>WENV182597568
OJJB01000946
141414
Bacteroidota
GGG
Pro
>WENV182597458
OJJB01000055
235207
Bacteroidota
CAT
Met
>WENV182597606
OJJB01003230
235207
Bacteroidota
CAT
Met
>WENV182597395
OJJB01000009
80607
Bacteroidota
GTA
Tyr
>WENV182597605
OJJB01003220
80607
Bacteroidota
GTA
Tyr
>WENV182597668
OJJB01010889
80607
Bacteroidota
GTA
Tyr
>WENV182597596
OJJB01002573
144590
Bacteroidota
GTT
Asn
>WENV182597597
OJJB01002573
144590
Bacteroidota
GTT
Asn
>WENV182597404
OJJB01000011
338314
Bacteroidota
CCT
Arg
>WENV182597471
OJJB01000067
338165
Bacteroidota
GGT
Thr
>WENV182597666
OJJB01010783
338165
Bacteroidota
GGT
Thr
>WENV182597569
OJJB01000966
425638
Bacteroidota
CTG
Gln
>WENV182597361
OJJB01000001
19317
Bacteroidota
GGA
Ser
>WENV182597669
OJJB01011451
23696
Bacteroidota
GCT
Ser
>WENV182597414
OJJB01000014
56823
Bacteroidota
TGA
Ser
>WENV182597415
OJJB01000014
56823
Bacteroidota
TGA
Ser
>WENV182597550
OJJB01000625
56823
Bacteroidota
TGA
Ser
>WENV182597614
OJJB01003576
56823
Bacteroidota
TGA
Ser
>WENV182597615
OJJB01003640
56823
Bacteroidota
TGA
Ser
>WENV182597610
OJJB01003468
338125
Bacteroidota
CCT
Arg
>WENV182597663
OJJB01010074
338125
Bacteroidota
CCT
Arg
>WENV182597416
OJJB01000016
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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