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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182618849
OJKG01006111
235097
Bacteroidota
TTT
Lys
>WENV182618809
OJKG01002223
95618
Bacteroidota
TAG
Leu
>WENV182618800
OJKG01001712
436206
Bacteroidota
TTG
Gln
>WENV182618889
OJKG01011642
436206
Bacteroidota
TTG
Gln
>WENV182618825
OJKG01003660
338124
Bacteroidota
CCG
Arg
>WENV182618898
OJKG01012663
338132
Bacteroidota
GCA
Cys
>WENV182618848
OJKG01005736
144688
Bacteroidota
CAT
Met
>WENV182618824
OJKG01003481
301449
Bacteroidota
CGG
Pro
>WENV182618882
OJKG01010863
301449
Bacteroidota
CGG
Pro
>WENV182618767
OJKG01000645
235207
Bacteroidota
CAT
Met
>WENV182618859
OJKG01007834
144596
Bacteroidota
GGC
Ala
>WENV182618784
OJKG01001011
52358
Bacteroidota
TGA
Ser
>WENV182618821
OJKG01003050
52358
Bacteroidota
TGA
Ser
>WENV182618857
OJKG01007513
52358
Bacteroidota
TGA
Ser
>WENV182618831
OJKG01004423
95559
Bacteroidota
TAG
Leu
>WENV182618872
OJKG01009761
419272
Bacteroidota
CTG
Gln
>WENV182618790
OJKG01001150
139743
Bacteroidota
GGG
Pro
>WENV182618854
OJKG01006910
338165
Bacteroidota
GGT
Thr
>WENV182618808
OJKG01002092
425638
Bacteroidota
CTG
Gln
>WENV182618845
OJKG01005088
239647
Bacteroidota
TTT
Lys
>WENV182618836
OJKG01004726
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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