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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182630202
OJKW01000107
119661
Verrucomicrobiota
CAA
Leu
>WENV182630124
OJKW01000060
155256
Verrucomicrobiota
TCT
Arg
>WENV182630033
OJKW01000020
246701
Verrucomicrobiota
TTT
Lys
>WENV182629994
OJKW01000008
345141
Verrucomicrobiota
TTG
Gln
>WENV182629996
OJKW01000008
345133
Verrucomicrobiota
GAC
Val
>WENV182630001
OJKW01000009
82054
Verrucomicrobiota
GTA
Tyr
>WENV182630155
OJKW01000073
246677
Verrucomicrobiota
CTT
Lys
>WENV182630156
OJKW01000073
246677
Verrucomicrobiota
CTT
Lys
>WENV182630053
OJKW01000030
344844
Verrucomicrobiota
GCA
Cys
>WENV182630094
OJKW01000041
155264
Verrucomicrobiota
GGG
Pro
>WENV182629995
OJKW01000008
344845
Verrucomicrobiota
CTG
Gln
>WENV182629998
OJKW01000008
128202
Verrucomicrobiota
GTC
Asp
>WENV182630504
OJKW01000517
128202
Verrucomicrobiota
GTC
Asp
>WENV182630111
OJKW01000052
414625
Verrucomicrobiota
CCC
Gly
>WENV182630234
OJKW01000150
46246
Verrucomicrobiota
TGA
Ser
>WENV182630116
OJKW01000054
97755
Verrucomicrobiota
TAG
Leu
>WENV182630054
OJKW01000030
246700
Verrucomicrobiota
TTC
Glu
>WENV182630218
OJKW01000131
246700
Verrucomicrobiota
TTC
Glu
>WENV182630170
OJKW01000077
347038
Verrucomicrobiota
GCC
Gly
>WENV182630217
OJKW01000131
347038
Verrucomicrobiota
GCC
Gly
>WENV182630853
OJKW01002144
246687
Verrucomicrobiota
CGC
Ala
>WENV182630113
OJKW01000052
419909
Verrucomicrobiota
TCC
Gly
>WENV182630171
OJKW01000077
344841
Verrucomicrobiota
CAC
Val
>WENV182630019
OJKW01000014
60880
Verrucomicrobiota
CAG
Leu
>WENV182630472
OJKW01000465
82056
Verrucomicrobiota
TAA
Leu
>WENV182630154
OJKW01000073
344842
Verrucomicrobiota
CGT
Thr
>WENV182630350
OJKW01000272
170105
Verrucomicrobiota
CAT
Met
>WENV182630055
OJKW01000030
345123
Verrucomicrobiota
TGT
Thr
>WENV182630115
OJKW01000054
345110
Verrucomicrobiota
CCT
Arg
>WENV182631096
OJKW01004732
344839
Verrucomicrobiota
GTG
His
>WENV182630179
OJKW01000087
7274
Verrucomicrobiota
CGA
Ser
>WENV182630473
OJKW01000465
246260
Verrucomicrobiota
>WENV182630153
OJKW01000073
155268
Verrucomicrobiota
CGG
Pro
>WENV182630052
OJKW01000030
82181
Verrucomicrobiota
AAG
Leu
>WENV182630092
OJKW01000041
246728
Verrucomicrobiota
GAA
Phe
>WENV182630474
OJKW01000465
7256
Verrucomicrobiota
GCT
Ser
>WENV182630216
OJKW01000131
345115
Verrucomicrobiota
CAT
Met
>WENV182629997
OJKW01000008
345119
Verrucomicrobiota
TAC
Val
>WENV182630000
OJKW01000009
345124
Verrucomicrobiota
GTT
Asn
>WENV182630230
OJKW01000142
17023
Verrucomicrobiota
GGA
Ser
>WENV182630112
OJKW01000052
345142
Verrucomicrobiota
CCG
Arg
>WENV182631097
OJKW01004732
246709
Verrucomicrobiota
CAT
Met
>WENV182630093
OJKW01000041
154693
Verrucomicrobiota
TGG
Pro
>WENV182630289
OJKW01000211
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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