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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182667884
OJNI01018810
119661
Verrucomicrobiota
CAA
Leu
>WENV182667582
OJNI01005231
155256
Verrucomicrobiota
TCT
Arg
>WENV182668014
OJNI01028113
246701
Verrucomicrobiota
TTT
Lys
>WENV182668193
OJNI01056466
345141
Verrucomicrobiota
TTG
Gln
>WENV182667822
OJNI01014728
345133
Verrucomicrobiota
GAC
Val
>WENV182668020
OJNI01028740
82054
Verrucomicrobiota
GTA
Tyr
>WENV182667986
OJNI01025803
246677
Verrucomicrobiota
CTT
Lys
>WENV182668179
OJNI01054282
344845
Verrucomicrobiota
CTG
Gln
>WENV182668051
OJNI01031689
414625
Verrucomicrobiota
CCC
Gly
>WENV182668055
OJNI01032483
46246
Verrucomicrobiota
TGA
Ser
>WENV182667980
OJNI01025196
97755
Verrucomicrobiota
TAG
Leu
>WENV182667742
OJNI01010779
246700
Verrucomicrobiota
TTC
Glu
>WENV182667824
OJNI01014837
246687
Verrucomicrobiota
CGC
Ala
>WENV182668052
OJNI01031689
419909
Verrucomicrobiota
TCC
Gly
>WENV182667859
OJNI01017017
344841
Verrucomicrobiota
CAC
Val
>WENV182667989
OJNI01026005
405704
Verrucomicrobiota
GCC
Gly
>WENV182667900
OJNI01019769
60880
Verrucomicrobiota
CAG
Leu
>WENV182667985
OJNI01025803
344842
Verrucomicrobiota
CGT
Thr
>WENV182667872
OJNI01018164
170105
Verrucomicrobiota
CAT
Met
>WENV182668065
OJNI01033985
287733
Verrucomicrobiota
CCA
Trp
>WENV182668081
OJNI01035964
345110
Verrucomicrobiota
CCT
Arg
>WENV182667974
OJNI01024857
344839
Verrucomicrobiota
GTG
His
>WENV182667717
OJNI01009326
246260
Verrucomicrobiota
>WENV182668058
OJNI01032871
82181
Verrucomicrobiota
AAG
Leu
>WENV182667952
OJNI01023110
7256
Verrucomicrobiota
GCT
Ser
>WENV182667972
OJNI01024412
345115
Verrucomicrobiota
CAT
Met
>WENV182668097
OJNI01038468
345119
Verrucomicrobiota
TAC
Val
>WENV182667643
OJNI01007255
17023
Verrucomicrobiota
GGA
Ser
>WENV182667818
OJNI01014482
246709
Verrucomicrobiota
CAT
Met
>WENV182668047
OJNI01031437
154693
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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