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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182683716
OJNX01004590
155958
Bacillota
GAT
Ile
>WENV182683971
OJNX01018566
144612
Bacillota
TCT
Arg
>WENV182684253
OJNX01066358
154063
Bacillota
CGG
Pro
>WENV182684024
OJNX01024183
156189
Bacillota
GAT
Ile
>WENV182684121
OJNX01038831
235154
Bacillota
GTT
Asn
>WENV182683586
OJNX01001908
37071
Bacillota
TGA
Ser
>WENV182684102
OJNX01035707
246023
Bacillota
TGC
Ala
>WENV182683174
OJNX01000034
59312
Bacillota
CAG
Leu
>WENV182683248
OJNX01000189
59312
Bacillota
CAG
Leu
>WENV182683809
OJNX01007530
238910
Bacillota
CTT
Lys
>WENV182683704
OJNX01004309
245370
Bacillota
TGT
Thr
>WENV182683267
OJNX01000243
338147
Bacillota
CTC
Glu
>WENV182683477
OJNX01001141
338147
Bacillota
CTC
Glu
>WENV182683968
OJNX01018302
338147
Bacillota
CTC
Glu
>WENV182684174
OJNX01046544
235150
Bacillota
TGC
Ala
>WENV182683525
OJNX01001449
340802
Bacillota
TTG
Gln
>WENV182683326
OJNX01000403
235114
Bacillota
TTT
Lys
>WENV182683827
OJNX01008365
235114
Bacillota
TTT
Lys
>WENV182683723
OJNX01004802
235091
Bacillota
CTT
Lys
>WENV182684223
OJNX01057227
11034
Bacillota
GGA
Ser
>WENV182683524
OJNX01001449
156937
Bacillota
GTG
His
>WENV182683729
OJNX01005047
235079
Bacillota
GAA
Phe
>WENV182683471
OJNX01001104
149041
Bacillota
GTC
Asp
>WENV182683538
OJNX01001486
144766
Bacillota
CAT
Met
>WENV182684030
OJNX01024999
245298
Bacillota
CGG
Pro
>WENV182683234
OJNX01000157
37269
Bacillota
TGA
Ser
>WENV182683913
OJNX01014312
413152
Bacillota
TCC
Gly
>WENV182683178
OJNX01000044
152492
Bacillota
GGG
Pro
>WENV182683746
OJNX01005333
152492
Bacillota
GGG
Pro
>WENV182683951
OJNX01016566
153911
Bacillota
GAT
Ile
>WENV182684050
OJNX01027615
153911
Bacillota
GAT
Ile
>WENV182683324
OJNX01000403
144610
Bacillota
GTG
His
>WENV182684029
OJNX01024999
411547
Bacillota
CTG
Gln
>WENV182683386
OJNX01000631
147684
Bacillota
ACG
Arg
>WENV182683615
OJNX01002307
147684
Bacillota
ACG
Arg
>WENV182683469
OJNX01001104
239832
Bacillota
TGT
Thr
>WENV182684189
OJNX01049380
411549
Bacillota
TTG
Gln
>WENV182683330
OJNX01000418
235142
Bacillota
CTT
Lys
>WENV182683612
OJNX01002264
235142
Bacillota
CTT
Lys
>WENV182683715
OJNX01004552
245386
Bacillota
CCA
Trp
>WENV182683897
OJNX01012934
59296
Bacillota
AAG
Leu
>WENV182684047
OJNX01027517
148188
Bacillota
CCG
Arg
>WENV182683789
OJNX01006165
235127
Bacillota
TTT
Lys
>WENV182684109
OJNX01036892
249522
Bacillota
TAC
Val
>WENV182684224
OJNX01057509
235124
Bacillota
TGG
Pro
>WENV182684175
OJNX01046932
338129
Bacillota
TGT
Thr
>WENV182683528
OJNX01001454
157838
Bacillota
GTC
Asp
>WENV182683766
OJNX01005668
144652
Bacillota
GTC
Asp
>WENV182683996
OJNX01020311
247734
Bacillota
TGC
Ala
>WENV182684081
OJNX01032542
235171
Bacillota
CCA
Trp
>WENV182684009
OJNX01021445
144621
Bacillota
GTT
Asn
>WENV182683625
OJNX01002424
235113
Bacillota
GAA
Phe
>WENV182683826
OJNX01008365
235113
Bacillota
GAA
Phe
>WENV182683877
OJNX01011570
58712
Bacillota
CAG
Leu
>WENV182683407
OJNX01000745
344240
Bacillota
GCC
Gly
>WENV182683382
OJNX01000599
157635
Bacillota
TCT
Arg
>WENV182683603
OJNX01002146
95563
Bacillota
GTA
Tyr
>WENV182683824
OJNX01008365
95563
Bacillota
GTA
Tyr
>WENV182683593
OJNX01002025
238945
Bacillota
GCC
Gly
>WENV182683677
OJNX01003492
238945
Bacillota
GCC
Gly
>WENV182683730
OJNX01005047
249259
Bacillota
GCC
Gly
>WENV182683405
OJNX01000742
338128
Bacillota
TTC
Glu
>WENV182683346
OJNX01000474
245344
Bacillota
GAA
Phe
>WENV182684186
OJNX01048412
150669
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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