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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182693744
OJOH01004484
24650
Bacillota
TAA
Leu
>WENV182693801
OJOH01006577
144612
Bacillota
TCT
Arg
>WENV182693866
OJOH01010381
154063
Bacillota
CGG
Pro
>WENV182694077
OJOH01044181
154063
Bacillota
CGG
Pro
>WENV182693485
OJOH01000763
267649
Bacillota
TAC
Val
>WENV182693824
OJOH01007659
235098
Bacillota
GAC
Val
>WENV182694037
OJOH01031415
338152
Bacillota
TTC
Glu
>WENV182693924
OJOH01014402
44854
Bacillota
TGA
Ser
>WENV182693917
OJOH01013744
246023
Bacillota
TGC
Ala
>WENV182693943
OJOH01016653
59312
Bacillota
CAG
Leu
>WENV182693407
OJOH01000470
338147
Bacillota
CTC
Glu
>WENV182693579
OJOH01001355
338147
Bacillota
CTC
Glu
>WENV182693389
OJOH01000404
340802
Bacillota
TTG
Gln
>WENV182694082
OJOH01047191
37083
Bacillota
TGA
Ser
>WENV182693618
OJOH01001875
11034
Bacillota
GGA
Ser
>WENV182693388
OJOH01000404
156937
Bacillota
GTG
His
>WENV182693492
OJOH01000805
274189
Bacillota
TGT
Thr
>WENV182693919
OJOH01013864
173314
Bacillota
GAT
Ile
>WENV182693605
OJOH01001676
245298
Bacillota
CGG
Pro
>WENV182693295
OJOH01000194
37269
Bacillota
TGA
Ser
>WENV182693893
OJOH01012407
340131
Bacillota
GTT
Asn
>WENV182694015
OJOH01025467
169968
Bacillota
CAT
Met
>WENV182693516
OJOH01000964
413152
Bacillota
TCC
Gly
>WENV182693374
OJOH01000371
173810
Bacillota
CAT
Met
>WENV182693156
OJOH01000033
152492
Bacillota
GGG
Pro
>WENV182693395
OJOH01000417
100326
Bacillota
GTA
Tyr
>WENV182693571
OJOH01001289
144610
Bacillota
GTG
His
>WENV182693817
OJOH01007366
144610
Bacillota
GTG
His
>WENV182693045
OJOH01000008
240017
Bacillota
GCC
Gly
>WENV182693604
OJOH01001676
411547
Bacillota
CTG
Gln
>WENV182693670
OJOH01002398
411547
Bacillota
CTG
Gln
>WENV182693159
OJOH01000037
147684
Bacillota
ACG
Arg
>WENV182693925
OJOH01014402
4624
Bacillota
GCT
Ser
>WENV182693044
OJOH01000008
263765
Bacillota
TAC
Val
>WENV182693754
OJOH01004732
241471
Bacillota
TGC
Ala
>WENV182693387
OJOH01000404
152151
Bacillota
TCT
Arg
>WENV182694095
OJOH01051845
411549
Bacillota
TTG
Gln
>WENV182693734
OJOH01004189
148188
Bacillota
CCG
Arg
>WENV182693755
OJOH01004732
241432
Bacillota
TGT
Thr
>WENV182693811
OJOH01007166
235124
Bacillota
TGG
Pro
>WENV182693944
OJOH01016682
338129
Bacillota
TGT
Thr
>WENV182693332
OJOH01000280
157838
Bacillota
GTC
Asp
>WENV182693651
OJOH01002113
144583
Bacillota
ACG
Arg
>WENV182693515
OJOH01000949
235171
Bacillota
CCA
Trp
>WENV182693671
OJOH01002419
144621
Bacillota
GTT
Asn
>WENV182693408
OJOH01000475
58712
Bacillota
CAG
Leu
>WENV182693455
OJOH01000623
248965
Bacillota
GCC
Gly
>WENV182693623
OJOH01001931
144594
Bacillota
CAC
Val
>WENV182693546
OJOH01001073
338127
Bacillota
TTG
Gln
>WENV182693161
OJOH01000037
272488
Bacillota
GAA
Phe
>WENV182693514
OJOH01000926
272488
Bacillota
GAA
Phe
>WENV182693879
OJOH01010918
272488
Bacillota
GAA
Phe
>WENV182693290
OJOH01000186
238945
Bacillota
GCC
Gly
>WENV182693844
OJOH01008734
273862
Bacillota
TGC
Ala
>WENV182693918
OJOH01013864
273862
Bacillota
TGC
Ala
>WENV182693992
OJOH01023016
338131
Bacillota
GCC
Gly
>WENV182693567
OJOH01001236
338128
Bacillota
TTC
Glu
>WENV182693678
OJOH01002667
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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