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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182693167
OJOH01000040
235097
Bacteroidota
TTT
Lys
>WENV182693322
OJOH01000251
235097
Bacteroidota
TTT
Lys
>WENV182693880
OJOH01011326
235102
Bacteroidota
CGT
Thr
>WENV182694051
OJOH01035362
267954
Bacteroidota
GCC
Gly
>WENV182693303
OJOH01000208
243025
Bacteroidota
CAT
Met
>WENV182693621
OJOH01001930
153993
Bacteroidota
GAT
Ile
>WENV182693940
OJOH01016305
339341
Bacteroidota
GGT
Thr
>WENV182693685
OJOH01002794
58715
Bacteroidota
GAG
Leu
>WENV182693714
OJOH01003380
338486
Bacteroidota
CAT
Met
>WENV182693297
OJOH01000197
415410
Bacteroidota
TTG
Gln
>WENV182693226
OJOH01000081
344692
Bacteroidota
GGT
Thr
>WENV182693040
OJOH01000007
341950
Bacteroidota
>WENV182693259
OJOH01000137
338124
Bacteroidota
CCG
Arg
>WENV182694034
OJOH01030532
238121
Bacteroidota
CTT
Lys
>WENV182693180
OJOH01000047
338132
Bacteroidota
GCA
Cys
>WENV182693345
OJOH01000307
338132
Bacteroidota
GCA
Cys
>WENV182693437
OJOH01000588
144933
Bacteroidota
TCT
Arg
>WENV182693286
OJOH01000179
144656
Bacteroidota
GTG
His
>WENV182693480
OJOH01000736
235207
Bacteroidota
CAT
Met
>WENV182693319
OJOH01000236
80607
Bacteroidota
GTA
Tyr
>WENV182693524
OJOH01000979
80607
Bacteroidota
GTA
Tyr
>WENV182693781
OJOH01005993
80607
Bacteroidota
GTA
Tyr
>WENV182693715
OJOH01003425
16999
Bacteroidota
GGA
Ser
>WENV182693406
OJOH01000469
419272
Bacteroidota
CTG
Gln
>WENV182693411
OJOH01000482
144655
Bacteroidota
GGC
Ala
>WENV182693439
OJOH01000590
95875
Bacteroidota
TAG
Leu
>WENV182693580
OJOH01001365
240012
Bacteroidota
CCC
Gly
>WENV182693274
OJOH01000158
44852
Bacteroidota
TAA
Leu
>WENV182694090
OJOH01049895
280513
Bacteroidota
TTT
Lys
>WENV182693109
OJOH01000022
50727
Bacteroidota
TGA
Ser
>WENV182693575
OJOH01001318
50727
Bacteroidota
TGA
Ser
>WENV182693672
OJOH01002434
50727
Bacteroidota
TGA
Ser
>WENV182693419
OJOH01000508
132360
Bacteroidota
GGG
Pro
>WENV182693872
OJOH01010708
239647
Bacteroidota
TTT
Lys
>WENV182693179
OJOH01000046
353927
Bacteroidota
TTC
Glu
>WENV182693578
OJOH01001333
185921
Bacteroidota
GTC
Asp
>WENV182693237
OJOH01000108
16224
Bacteroidota
GGA
Ser
>WENV182693166
OJOH01000039
151960
Bacteroidota
GGC
Ala
>WENV182693384
OJOH01000403
16220
Bacteroidota
GGA
Ser
>WENV182693610
OJOH01001767
338125
Bacteroidota
CCT
Arg
>WENV182693383
OJOH01000401
235129
Bacteroidota
GCC
Gly
>WENV182693593
OJOH01001498
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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