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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182694417
OJOI01000879
119661
Verrucomicrobiota
CAA
Leu
>WENV182694316
OJOI01000448
155256
Verrucomicrobiota
TCT
Arg
>WENV182694331
OJOI01000515
246701
Verrucomicrobiota
TTT
Lys
>WENV182694436
OJOI01000953
345141
Verrucomicrobiota
TTG
Gln
>WENV182694455
OJOI01001049
345133
Verrucomicrobiota
GAC
Val
>WENV182694427
OJOI01000913
82054
Verrucomicrobiota
GTA
Tyr
>WENV182694829
OJOI01006556
246677
Verrucomicrobiota
CTT
Lys
>WENV182694516
OJOI01001409
344844
Verrucomicrobiota
GCA
Cys
>WENV182694457
OJOI01001056
155264
Verrucomicrobiota
GGG
Pro
>WENV182694507
OJOI01001344
344845
Verrucomicrobiota
CTG
Gln
>WENV182694310
OJOI01000413
128202
Verrucomicrobiota
GTC
Asp
>WENV182694400
OJOI01000778
414625
Verrucomicrobiota
CCC
Gly
>WENV182694603
OJOI01002296
46246
Verrucomicrobiota
TGA
Ser
>WENV182694327
OJOI01000496
97755
Verrucomicrobiota
TAG
Leu
>WENV182694517
OJOI01001409
246700
Verrucomicrobiota
TTC
Glu
>WENV182694705
OJOI01003607
246687
Verrucomicrobiota
CGC
Ala
>WENV182694399
OJOI01000778
419909
Verrucomicrobiota
TCC
Gly
>WENV182694630
OJOI01002506
344841
Verrucomicrobiota
CAC
Val
>WENV182694577
OJOI01001975
82056
Verrucomicrobiota
TAA
Leu
>WENV182694828
OJOI01006556
344842
Verrucomicrobiota
CGT
Thr
>WENV182694508
OJOI01001350
170105
Verrucomicrobiota
CAT
Met
>WENV182694547
OJOI01001752
345110
Verrucomicrobiota
CCT
Arg
>WENV182694544
OJOI01001693
344839
Verrucomicrobiota
GTG
His
>WENV182694465
OJOI01001102
155268
Verrucomicrobiota
CGG
Pro
>WENV182694832
OJOI01006808
246728
Verrucomicrobiota
GAA
Phe
>WENV182694784
OJOI01005002
7256
Verrucomicrobiota
GCT
Ser
>WENV182694562
OJOI01001856
345115
Verrucomicrobiota
CAT
Met
>WENV182694168
OJOI01000076
345124
Verrucomicrobiota
GTT
Asn
>WENV182694361
OJOI01000607
368497
Verrucomicrobiota
GCC
Gly
>WENV182694264
OJOI01000271
345142
Verrucomicrobiota
CCG
Arg
>WENV182694953
OJOI01013084
246709
Verrucomicrobiota
CAT
Met
>WENV182694833
OJOI01006808
154693
Verrucomicrobiota
TGG
Pro
>WENV182694655
OJOI01002756
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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