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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182708054
OJOZ01000355
235097
Bacteroidota
TTT
Lys
>WENV182708066
OJOZ01000483
235097
Bacteroidota
TTT
Lys
>WENV182708109
OJOZ01000978
235097
Bacteroidota
TTT
Lys
>WENV182707949
OJOZ01000067
235102
Bacteroidota
CGT
Thr
>WENV182707914
OJOZ01000005
243025
Bacteroidota
CAT
Met
>WENV182707976
OJOZ01000125
17323
Bacteroidota
GGA
Ser
>WENV182707936
OJOZ01000028
415410
Bacteroidota
TTG
Gln
>WENV182707942
OJOZ01000039
415410
Bacteroidota
TTG
Gln
>WENV182707948
OJOZ01000054
344692
Bacteroidota
GGT
Thr
>WENV182708093
OJOZ01000714
341950
Bacteroidota
>WENV182707944
OJOZ01000047
338124
Bacteroidota
CCG
Arg
>WENV182707980
OJOZ01000139
338132
Bacteroidota
GCA
Cys
>WENV182708008
OJOZ01000209
338132
Bacteroidota
GCA
Cys
>WENV182708026
OJOZ01000265
338132
Bacteroidota
GCA
Cys
>WENV182707934
OJOZ01000025
144656
Bacteroidota
GTG
His
>WENV182707953
OJOZ01000072
235207
Bacteroidota
CAT
Met
>WENV182707965
OJOZ01000092
235207
Bacteroidota
CAT
Met
>WENV182708086
OJOZ01000652
144596
Bacteroidota
GGC
Ala
>WENV182707911
OJOZ01000001
80607
Bacteroidota
GTA
Tyr
>WENV182708040
OJOZ01000304
80607
Bacteroidota
GTA
Tyr
>WENV182708090
OJOZ01000687
80607
Bacteroidota
GTA
Tyr
>WENV182707933
OJOZ01000019
52358
Bacteroidota
TGA
Ser
>WENV182708103
OJOZ01000853
52358
Bacteroidota
TGA
Ser
>WENV182708000
OJOZ01000191
154643
Bacteroidota
CAT
Met
>WENV182707946
OJOZ01000050
95559
Bacteroidota
TAG
Leu
>WENV182707930
OJOZ01000018
419272
Bacteroidota
CTG
Gln
>WENV182707929
OJOZ01000016
144655
Bacteroidota
GGC
Ala
>WENV182707919
OJOZ01000007
44852
Bacteroidota
TAA
Leu
>WENV182707990
OJOZ01000166
132360
Bacteroidota
GGG
Pro
>WENV182708024
OJOZ01000262
132360
Bacteroidota
GGG
Pro
>WENV182708087
OJOZ01000670
132360
Bacteroidota
GGG
Pro
>WENV182707984
OJOZ01000154
425638
Bacteroidota
CTG
Gln
>WENV182707989
OJOZ01000166
425638
Bacteroidota
CTG
Gln
>WENV182708079
OJOZ01000576
425638
Bacteroidota
CTG
Gln
>WENV182708031
OJOZ01000266
353927
Bacteroidota
TTC
Glu
>WENV182708298
OJOZ01021326
353927
Bacteroidota
TTC
Glu
>WENV182707926
OJOZ01000013
414426
Bacteroidota
CTG
Gln
>WENV182707971
OJOZ01000112
414426
Bacteroidota
CTG
Gln
>WENV182708091
OJOZ01000694
16224
Bacteroidota
GGA
Ser
>WENV182708240
OJOZ01010029
151960
Bacteroidota
GGC
Ala
>WENV182707931
OJOZ01000018
16220
Bacteroidota
GGA
Ser
>WENV182707921
OJOZ01000009
338125
Bacteroidota
CCT
Arg
>WENV182708042
OJOZ01000307
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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