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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182708317
OJPA01000001
119661
Verrucomicrobiota
CAA
Leu
>WENV182708330
OJPA01000003
155256
Verrucomicrobiota
TCT
Arg
>WENV182708329
OJPA01000003
246701
Verrucomicrobiota
TTT
Lys
>WENV182708336
OJPA01000005
345141
Verrucomicrobiota
TTG
Gln
>WENV182708338
OJPA01000005
345133
Verrucomicrobiota
GAC
Val
>WENV182708363
OJPA01000020
82054
Verrucomicrobiota
GTA
Tyr
>WENV182708403
OJPA01000037
246677
Verrucomicrobiota
CTT
Lys
>WENV182708369
OJPA01000027
344844
Verrucomicrobiota
GCA
Cys
>WENV182708319
OJPA01000001
155264
Verrucomicrobiota
GGG
Pro
>WENV182708337
OJPA01000005
344845
Verrucomicrobiota
CTG
Gln
>WENV182708333
OJPA01000005
128202
Verrucomicrobiota
GTC
Asp
>WENV182708350
OJPA01000013
128202
Verrucomicrobiota
GTC
Asp
>WENV182708320
OJPA01000001
414625
Verrucomicrobiota
CCC
Gly
>WENV182708413
OJPA01000050
46246
Verrucomicrobiota
TGA
Ser
>WENV182708318
OJPA01000001
97755
Verrucomicrobiota
TAG
Leu
>WENV182708370
OJPA01000027
246700
Verrucomicrobiota
TTC
Glu
>WENV182708551
OJPA01000270
246700
Verrucomicrobiota
TTC
Glu
>WENV182708491
OJPA01000138
347038
Verrucomicrobiota
GCC
Gly
>WENV182708550
OJPA01000270
347038
Verrucomicrobiota
GCC
Gly
>WENV182708489
OJPA01000130
246687
Verrucomicrobiota
CGC
Ala
>WENV182708335
OJPA01000005
344841
Verrucomicrobiota
CAC
Val
>WENV182708554
OJPA01000274
60880
Verrucomicrobiota
CAG
Leu
>WENV182708316
OJPA01000001
82056
Verrucomicrobiota
TAA
Leu
>WENV182708402
OJPA01000037
344842
Verrucomicrobiota
CGT
Thr
>WENV182708344
OJPA01000007
170105
Verrucomicrobiota
CAT
Met
>WENV182708371
OJPA01000027
345123
Verrucomicrobiota
TGT
Thr
>WENV182708315
OJPA01000001
345110
Verrucomicrobiota
CCT
Arg
>WENV182708552
OJPA01000270
344839
Verrucomicrobiota
GTG
His
>WENV182708412
OJPA01000046
7274
Verrucomicrobiota
CGA
Ser
>WENV182708518
OJPA01000187
246260
Verrucomicrobiota
>WENV182708401
OJPA01000037
155268
Verrucomicrobiota
CGG
Pro
>WENV182708368
OJPA01000027
82181
Verrucomicrobiota
AAG
Leu
>WENV182708313
OJPA01000001
246728
Verrucomicrobiota
GAA
Phe
>WENV182708519
OJPA01000187
7256
Verrucomicrobiota
GCT
Ser
>WENV182708414
OJPA01000050
345115
Verrucomicrobiota
CAT
Met
>WENV182708332
OJPA01000005
345119
Verrucomicrobiota
TAC
Val
>WENV182708362
OJPA01000020
345124
Verrucomicrobiota
GTT
Asn
>WENV182708351
OJPA01000013
17023
Verrucomicrobiota
GGA
Ser
>WENV182708321
OJPA01000001
345142
Verrucomicrobiota
CCG
Arg
>WENV182708553
OJPA01000270
246709
Verrucomicrobiota
CAT
Met
>WENV182708314
OJPA01000001
154693
Verrucomicrobiota
TGG
Pro
>WENV182708366
OJPA01000026
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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