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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182725484
OJPT01002392
235102
Bacteroidota
CGT
Thr
>WENV182725447
OJPT01001628
144657
Bacteroidota
CGG
Pro
>WENV182725778
OJPT01019134
144657
Bacteroidota
CGG
Pro
>WENV182725548
OJPT01004281
243025
Bacteroidota
CAT
Met
>WENV182725583
OJPT01005787
338155
Bacteroidota
CTC
Glu
>WENV182725862
OJPT01036034
339341
Bacteroidota
GGT
Thr
>WENV182725430
OJPT01001477
58715
Bacteroidota
GAG
Leu
>WENV182725492
OJPT01002514
58715
Bacteroidota
GAG
Leu
>WENV182725286
OJPT01000375
17323
Bacteroidota
GGA
Ser
>WENV182725265
OJPT01000250
338486
Bacteroidota
CAT
Met
>WENV182725402
OJPT01001264
338486
Bacteroidota
CAT
Met
>WENV182725451
OJPT01001713
338486
Bacteroidota
CAT
Met
>WENV182725697
OJPT01011859
338486
Bacteroidota
CAT
Met
>WENV182725546
OJPT01004179
59689
Bacteroidota
CAG
Leu
>WENV182725516
OJPT01003333
20893
Bacteroidota
GGA
Ser
>WENV182725180
OJPT01000047
344692
Bacteroidota
GGT
Thr
>WENV182725357
OJPT01000738
344692
Bacteroidota
GGT
Thr
>WENV182725227
OJPT01000111
338124
Bacteroidota
CCG
Arg
>WENV182725278
OJPT01000325
338124
Bacteroidota
CCG
Arg
>WENV182725282
OJPT01000347
235203
Bacteroidota
TTT
Lys
>WENV182725467
OJPT01001899
238121
Bacteroidota
CTT
Lys
>WENV182725574
OJPT01005273
238121
Bacteroidota
CTT
Lys
>WENV182725536
OJPT01003806
126641
Bacteroidota
TAC
Val
>WENV182725171
OJPT01000039
338132
Bacteroidota
GCA
Cys
>WENV182725240
OJPT01000135
338132
Bacteroidota
GCA
Cys
>WENV182725499
OJPT01002760
338132
Bacteroidota
GCA
Cys
>WENV182725500
OJPT01002766
338132
Bacteroidota
GCA
Cys
>WENV182725530
OJPT01003644
338132
Bacteroidota
GCA
Cys
>WENV182725771
OJPT01018882
338132
Bacteroidota
GCA
Cys
>WENV182725575
OJPT01005273
45423
Bacteroidota
TGA
Ser
>WENV182725124
OJPT01000010
301449
Bacteroidota
CGG
Pro
>WENV182725294
OJPT01000423
301449
Bacteroidota
CGG
Pro
>WENV182725215
OJPT01000083
144933
Bacteroidota
TCT
Arg
>WENV182725273
OJPT01000314
141414
Bacteroidota
GGG
Pro
>WENV182725303
OJPT01000466
141414
Bacteroidota
GGG
Pro
>WENV182725472
OJPT01001993
141414
Bacteroidota
GGG
Pro
>WENV182725577
OJPT01005530
141414
Bacteroidota
GGG
Pro
>WENV182725765
OJPT01018314
141414
Bacteroidota
GGG
Pro
>WENV182725768
OJPT01018724
303954
Bacteroidota
GCC
Gly
>WENV182725163
OJPT01000037
235207
Bacteroidota
CAT
Met
>WENV182725164
OJPT01000037
235207
Bacteroidota
CAT
Met
>WENV182725192
OJPT01000057
235207
Bacteroidota
CAT
Met
>WENV182725288
OJPT01000383
235207
Bacteroidota
CAT
Met
>WENV182725405
OJPT01001279
144659
Bacteroidota
GTG
His
>WENV182725587
OJPT01005840
144596
Bacteroidota
GGC
Ala
>WENV182725559
OJPT01004766
80607
Bacteroidota
GTA
Tyr
>WENV182725569
OJPT01005035
80607
Bacteroidota
GTA
Tyr
>WENV182725647
OJPT01008839
80607
Bacteroidota
GTA
Tyr
>WENV182725388
OJPT01001108
16999
Bacteroidota
GGA
Ser
>WENV182725473
OJPT01002122
80614
Bacteroidota
>WENV182725316
OJPT01000504
80614
Bacteroidota
>WENV182725406
OJPT01001297
154643
Bacteroidota
CAT
Met
>WENV182725677
OJPT01009610
144590
Bacteroidota
GTT
Asn
>WENV182725219
OJPT01000091
95559
Bacteroidota
TAG
Leu
>WENV182725254
OJPT01000170
338164
Bacteroidota
TTC
Glu
>WENV182725515
OJPT01003326
95875
Bacteroidota
TAG
Leu
>WENV182725620
OJPT01007521
240012
Bacteroidota
CCC
Gly
>WENV182725270
OJPT01000293
44852
Bacteroidota
TAA
Leu
>WENV182725371
OJPT01000903
44852
Bacteroidota
TAA
Leu
>WENV182725494
OJPT01002571
147439
Bacteroidota
TCT
Arg
>WENV182725139
OJPT01000017
150485
Bacteroidota
GTT
Asn
>WENV182725140
OJPT01000017
150485
Bacteroidota
GTT
Asn
>WENV182725626
OJPT01007928
411550
Bacteroidota
CTG
Gln
>WENV182725313
OJPT01000494
19528
Bacteroidota
GGA
Ser
>WENV182725105
OJPT01000003
425638
Bacteroidota
CTG
Gln
>WENV182725173
OJPT01000042
353927
Bacteroidota
TTC
Glu
>WENV182725289
OJPT01000388
185921
Bacteroidota
GTC
Asp
>WENV182725863
OJPT01036035
185921
Bacteroidota
GTC
Asp
>WENV182725414
OJPT01001362
23696
Bacteroidota
GCT
Ser
>WENV182725582
OJPT01005787
23696
Bacteroidota
GCT
Ser
>WENV182725510
OJPT01003260
414426
Bacteroidota
CTG
Gln
>WENV182725146
OJPT01000023
56823
Bacteroidota
TGA
Ser
>WENV182725147
OJPT01000026
56823
Bacteroidota
TGA
Ser
>WENV182725246
OJPT01000142
56823
Bacteroidota
TGA
Ser
>WENV182725549
OJPT01004420
56823
Bacteroidota
TGA
Ser
>WENV182725650
OJPT01008905
56823
Bacteroidota
TGA
Ser
>WENV182725714
OJPT01013567
56823
Bacteroidota
TGA
Ser
>WENV182725818
OJPT01025436
56823
Bacteroidota
TGA
Ser
>WENV182725352
OJPT01000720
16224
Bacteroidota
GGA
Ser
>WENV182725504
OJPT01003007
16220
Bacteroidota
GGA
Ser
>WENV182725177
OJPT01000044
338125
Bacteroidota
CCT
Arg
>WENV182725754
OJPT01016269
338125
Bacteroidota
CCT
Arg
>WENV182725283
OJPT01000366
235129
Bacteroidota
GCC
Gly
>WENV182725285
OJPT01000366
235129
Bacteroidota
GCC
Gly
>WENV182725428
OJPT01001477
235129
Bacteroidota
GCC
Gly
>WENV182725542
OJPT01004095
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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