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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182731385
OJQA01000118
235097
Bacteroidota
TTT
Lys
>WENV182731567
OJQA01000842
235097
Bacteroidota
TTT
Lys
>WENV182732076
OJQA01032008
235102
Bacteroidota
CGT
Thr
>WENV182732083
OJQA01033285
144657
Bacteroidota
CGG
Pro
>WENV182731527
OJQA01000645
243025
Bacteroidota
CAT
Met
>WENV182731495
OJQA01000452
338155
Bacteroidota
CTC
Glu
>WENV182731996
OJQA01018570
153993
Bacteroidota
GAT
Ile
>WENV182731726
OJQA01003273
58715
Bacteroidota
GAG
Leu
>WENV182731862
OJQA01008735
46165
Bacteroidota
TGA
Ser
>WENV182731705
OJQA01002986
17323
Bacteroidota
GGA
Ser
>WENV182731392
OJQA01000124
338486
Bacteroidota
CAT
Met
>WENV182731582
OJQA01001016
338486
Bacteroidota
CAT
Met
>WENV182731369
OJQA01000089
415410
Bacteroidota
TTG
Gln
>WENV182731578
OJQA01000971
415410
Bacteroidota
TTG
Gln
>WENV182731725
OJQA01003273
59689
Bacteroidota
CAG
Leu
>WENV182731729
OJQA01003376
59689
Bacteroidota
CAG
Leu
>WENV182731339
OJQA01000030
80835
Bacteroidota
GTA
Tyr
>WENV182731313
OJQA01000006
155123
Bacteroidota
GTT
Asn
>WENV182731842
OJQA01007913
344692
Bacteroidota
GGT
Thr
>WENV182731721
OJQA01003246
341950
Bacteroidota
>WENV182731727
OJQA01003306
341950
Bacteroidota
>WENV182731324
OJQA01000010
338124
Bacteroidota
CCG
Arg
>WENV182731661
OJQA01002009
126641
Bacteroidota
TAC
Val
>WENV182731349
OJQA01000042
338132
Bacteroidota
GCA
Cys
>WENV182731684
OJQA01002512
45423
Bacteroidota
TGA
Ser
>WENV182731613
OJQA01001394
58714
Bacteroidota
CAA
Leu
>WENV182731397
OJQA01000137
144933
Bacteroidota
TCT
Arg
>WENV182731416
OJQA01000182
144656
Bacteroidota
GTG
His
>WENV182731418
OJQA01000189
235207
Bacteroidota
CAT
Met
>WENV182731516
OJQA01000603
144659
Bacteroidota
GTG
His
>WENV182731388
OJQA01000121
80607
Bacteroidota
GTA
Tyr
>WENV182731431
OJQA01000241
80607
Bacteroidota
GTA
Tyr
>WENV182731754
OJQA01003940
80607
Bacteroidota
GTA
Tyr
>WENV182731653
OJQA01001924
16999
Bacteroidota
GGA
Ser
>WENV182731596
OJQA01001178
80614
Bacteroidota
>WENV182731539
OJQA01000683
154643
Bacteroidota
CAT
Met
>WENV182731415
OJQA01000180
144590
Bacteroidota
GTT
Asn
>WENV182731430
OJQA01000233
95559
Bacteroidota
TAG
Leu
>WENV182731393
OJQA01000126
419272
Bacteroidota
CTG
Gln
>WENV182731335
OJQA01000029
144655
Bacteroidota
GGC
Ala
>WENV182731464
OJQA01000320
95875
Bacteroidota
TAG
Leu
>WENV182731837
OJQA01007692
172372
Bacteroidota
TGC
Ala
>WENV182731620
OJQA01001523
240012
Bacteroidota
CCC
Gly
>WENV182731377
OJQA01000101
44852
Bacteroidota
TAA
Leu
>WENV182732082
OJQA01033171
411550
Bacteroidota
CTG
Gln
>WENV182731360
OJQA01000064
50727
Bacteroidota
TGA
Ser
>WENV182731450
OJQA01000271
50727
Bacteroidota
TGA
Ser
>WENV182731625
OJQA01001668
50727
Bacteroidota
TGA
Ser
>WENV182731821
OJQA01006698
50727
Bacteroidota
TGA
Ser
>WENV182731374
OJQA01000098
132360
Bacteroidota
GGG
Pro
>WENV182731687
OJQA01002606
132360
Bacteroidota
GGG
Pro
>WENV182731322
OJQA01000008
353927
Bacteroidota
TTC
Glu
>WENV182731673
OJQA01002336
185921
Bacteroidota
GTC
Asp
>WENV182731452
OJQA01000281
23696
Bacteroidota
GCT
Ser
>WENV182731494
OJQA01000452
23696
Bacteroidota
GCT
Ser
>WENV182731348
OJQA01000038
414426
Bacteroidota
CTG
Gln
>WENV182731427
OJQA01000219
16224
Bacteroidota
GGA
Ser
>WENV182731611
OJQA01001352
151960
Bacteroidota
GGC
Ala
>WENV182731488
OJQA01000434
16220
Bacteroidota
GGA
Ser
>WENV182731352
OJQA01000047
338125
Bacteroidota
CCT
Arg
>WENV182731368
OJQA01000084
338125
Bacteroidota
CCT
Arg
>WENV182731724
OJQA01003273
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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