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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182733695
OJQD01003286
144612
Bacillota
TCT
Arg
>WENV182733635
OJQD01001162
235098
Bacillota
GAC
Val
>WENV182733760
OJQD01009429
235098
Bacillota
GAC
Val
>WENV182733712
OJQD01004798
44854
Bacillota
TGA
Ser
>WENV182733591
OJQD01000441
37071
Bacillota
TGA
Ser
>WENV182733669
OJQD01002341
59312
Bacillota
CAG
Leu
>WENV182733703
OJQD01003589
238910
Bacillota
CTT
Lys
>WENV182733604
OJQD01000520
338147
Bacillota
CTC
Glu
>WENV182733603
OJQD01000501
235114
Bacillota
TTT
Lys
>WENV182733729
OJQD01005868
235114
Bacillota
TTT
Lys
>WENV182733761
OJQD01009507
235091
Bacillota
CTT
Lys
>WENV182733645
OJQD01001571
44859
Bacillota
AAG
Leu
>WENV182733668
OJQD01002341
44859
Bacillota
AAG
Leu
>WENV182733783
OJQD01012066
11034
Bacillota
GGA
Ser
>WENV182733857
OJQD01028189
247057
Bacillota
TGC
Ala
>WENV182733738
OJQD01006393
338149
Bacillota
CTC
Glu
>WENV182733777
OJQD01011066
245298
Bacillota
CGG
Pro
>WENV182733870
OJQD01031189
413152
Bacillota
TCC
Gly
>WENV182733874
OJQD01031279
144599
Bacillota
GTC
Asp
>WENV182733866
OJQD01030244
153911
Bacillota
GAT
Ile
>WENV182733601
OJQD01000501
144610
Bacillota
GTG
His
>WENV182733865
OJQD01030193
147684
Bacillota
ACG
Arg
>WENV182733713
OJQD01004798
4624
Bacillota
GCT
Ser
>WENV182733742
OJQD01007113
235095
Bacillota
GGT
Thr
>WENV182733822
OJQD01019656
235095
Bacillota
GGT
Thr
>WENV182733620
OJQD01000670
235142
Bacillota
CTT
Lys
>WENV182733670
OJQD01002394
148188
Bacillota
CCG
Arg
>WENV182733662
OJQD01001988
235127
Bacillota
TTT
Lys
>WENV182733659
OJQD01001988
147674
Bacillota
TCT
Arg
>WENV182733823
OJQD01020236
235124
Bacillota
TGG
Pro
>WENV182733723
OJQD01005868
144652
Bacillota
GTC
Asp
>WENV182733773
OJQD01010504
144652
Bacillota
GTC
Asp
>WENV182733685
OJQD01002924
235171
Bacillota
CCA
Trp
>WENV182733686
OJQD01002983
144621
Bacillota
GTT
Asn
>WENV182733728
OJQD01005868
235113
Bacillota
GAA
Phe
>WENV182733697
OJQD01003286
58712
Bacillota
CAG
Leu
>WENV182733734
OJQD01006213
245296
Bacillota
CCC
Gly
>WENV182733813
OJQD01017121
144594
Bacillota
CAC
Val
>WENV182733656
OJQD01001973
95563
Bacillota
GTA
Tyr
>WENV182733726
OJQD01005868
95563
Bacillota
GTA
Tyr
>WENV182733733
OJQD01006188
338128
Bacillota
TTC
Glu
>WENV182733864
OJQD01029746
245344
Bacillota
GAA
Phe
>WENV182733840
OJQD01024150
150669
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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