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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182734230
OJQE01009386
44854
Bacillota
TGA
Ser
>WENV182734234
OJQE01009793
235154
Bacillota
GTT
Asn
>WENV182734265
OJQE01012793
235154
Bacillota
GTT
Asn
>WENV182734267
OJQE01012793
429443
Bacillota
GCA
Cys
>WENV182734204
OJQE01007340
246023
Bacillota
TGC
Ala
>WENV182734063
OJQE01001807
59312
Bacillota
CAG
Leu
>WENV182733990
OJQE01000697
338147
Bacillota
CTC
Glu
>WENV182734174
OJQE01005424
235137
Bacillota
TGC
Ala
>WENV182734201
OJQE01007324
338143
Bacillota
CTC
Glu
>WENV182734311
OJQE01021330
341763
Bacillota
CTC
Glu
>WENV182734056
OJQE01001695
44859
Bacillota
AAG
Leu
>WENV182734027
OJQE01001352
11034
Bacillota
GGA
Ser
>WENV182734295
OJQE01017725
338149
Bacillota
CTC
Glu
>WENV182734044
OJQE01001606
245298
Bacillota
CGG
Pro
>WENV182733951
OJQE01000273
37269
Bacillota
TGA
Ser
>WENV182734203
OJQE01007340
201704
Bacillota
GAT
Ile
>WENV182734076
OJQE01001898
144610
Bacillota
GTG
His
>WENV182734365
OJQE01033631
144610
Bacillota
GTG
His
>WENV182734078
OJQE01001926
411547
Bacillota
CTG
Gln
>WENV182734231
OJQE01009386
4624
Bacillota
GCT
Ser
>WENV182734119
OJQE01003165
18852
Bacillota
GCT
Ser
>WENV182734000
OJQE01000878
235095
Bacillota
GGT
Thr
>WENV182734322
OJQE01023593
419639
Bacillota
GCA
Cys
>WENV182734030
OJQE01001415
235142
Bacillota
CTT
Lys
>WENV182734251
OJQE01010871
148188
Bacillota
CCG
Arg
>WENV182734191
OJQE01006723
237846
Bacillota
GCC
Gly
>WENV182733966
OJQE01000477
256380
Bacillota
>WENV182734062
OJQE01001795
338129
Bacillota
TGT
Thr
>WENV182733976
OJQE01000567
144583
Bacillota
ACG
Arg
>WENV182734047
OJQE01001624
144672
Bacillota
TCT
Arg
>WENV182734142
OJQE01004037
144672
Bacillota
TCT
Arg
>WENV182734335
OJQE01024578
144652
Bacillota
GTC
Asp
>WENV182734149
OJQE01004478
238974
Bacillota
GAA
Phe
>WENV182734067
OJQE01001824
243098
Bacillota
GGT
Thr
>WENV182734026
OJQE01001350
58712
Bacillota
CAG
Leu
>WENV182734319
OJQE01023190
245296
Bacillota
CCC
Gly
>WENV182734243
OJQE01010253
272992
Bacillota
CTT
Lys
>WENV182734287
OJQE01015710
196632
Bacillota
GTC
Asp
>WENV182734145
OJQE01004232
144594
Bacillota
CAC
Val
>WENV182734021
OJQE01001235
95563
Bacillota
GTA
Tyr
>WENV182734214
OJQE01007892
249259
Bacillota
GCC
Gly
>WENV182734102
OJQE01002512
157105
Bacillota
GAT
Ile
>WENV182733933
OJQE01000150
338131
Bacillota
GCC
Gly
>WENV182734084
OJQE01002032
338131
Bacillota
GCC
Gly
>WENV182734113
OJQE01002952
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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