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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182738276
OJQJ01003639
196621
Bacillota
GTC
Asp
>WENV182738529
OJQJ01024670
202812
Bacillota
CAT
Met
>WENV182738068
OJQJ01000741
309417
Bacillota
GGC
Ala
>WENV182738202
OJQJ01002080
309417
Bacillota
GGC
Ala
>WENV182738291
OJQJ01003883
309417
Bacillota
GGC
Ala
>WENV182738436
OJQJ01013103
158247
Bacillota
>WENV182738277
OJQJ01003663
144612
Bacillota
TCT
Arg
>WENV182738307
OJQJ01004832
144612
Bacillota
TCT
Arg
>WENV182737983
OJQJ01000315
267649
Bacillota
TAC
Val
>WENV182738329
OJQJ01005503
267649
Bacillota
TAC
Val
>WENV182738135
OJQJ01001322
235098
Bacillota
GAC
Val
>WENV182738289
OJQJ01003821
235098
Bacillota
GAC
Val
>WENV182738239
OJQJ01002684
44854
Bacillota
TGA
Ser
>WENV182737806
OJQJ01000027
37071
Bacillota
TGA
Ser
>WENV182738271
OJQJ01003548
304022
Bacillota
GCC
Gly
>WENV182738061
OJQJ01000679
302150
Bacillota
TAC
Val
>WENV182738600
OJQJ01048433
246023
Bacillota
TGC
Ala
>WENV182737798
OJQJ01000020
59312
Bacillota
CAG
Leu
>WENV182737908
OJQJ01000135
59312
Bacillota
CAG
Leu
>WENV182737834
OJQJ01000048
338147
Bacillota
CTC
Glu
>WENV182737893
OJQJ01000118
338147
Bacillota
CTC
Glu
>WENV182737898
OJQJ01000122
338147
Bacillota
CTC
Glu
>WENV182738010
OJQJ01000430
338147
Bacillota
CTC
Glu
>WENV182738011
OJQJ01000430
338147
Bacillota
CTC
Glu
>WENV182738012
OJQJ01000430
338147
Bacillota
CTC
Glu
>WENV182738099
OJQJ01000980
338147
Bacillota
CTC
Glu
>WENV182738411
OJQJ01010991
340802
Bacillota
TTG
Gln
>WENV182737981
OJQJ01000305
293599
Bacillota
CTT
Lys
>WENV182737891
OJQJ01000108
235114
Bacillota
TTT
Lys
>WENV182738101
OJQJ01000998
429429
Bacillota
CCA
Trp
>WENV182738111
OJQJ01001131
41154
Bacillota
TAA
Leu
>WENV182737796
OJQJ01000020
44859
Bacillota
AAG
Leu
>WENV182737797
OJQJ01000020
44859
Bacillota
AAG
Leu
>WENV182738259
OJQJ01003225
11034
Bacillota
GGA
Ser
>WENV182738300
OJQJ01004521
11034
Bacillota
GGA
Ser
>WENV182738487
OJQJ01019232
247057
Bacillota
TGC
Ala
>WENV182738410
OJQJ01010991
156937
Bacillota
GTG
His
>WENV182738594
OJQJ01043225
235079
Bacillota
GAA
Phe
>WENV182738297
OJQJ01004386
338149
Bacillota
CTC
Glu
>WENV182738244
OJQJ01002797
245298
Bacillota
CGG
Pro
>WENV182738233
OJQJ01002513
155089
Bacillota
CAT
Met
>WENV182738540
OJQJ01027065
287000
Bacillota
GTT
Asn
>WENV182738440
OJQJ01013473
413152
Bacillota
TCC
Gly
>WENV182738499
OJQJ01020743
162445
Bacillota
CAT
Met
>WENV182738599
OJQJ01048433
201704
Bacillota
GAT
Ile
>WENV182738006
OJQJ01000416
100326
Bacillota
GTA
Tyr
>WENV182737889
OJQJ01000108
144610
Bacillota
GTG
His
>WENV182738243
OJQJ01002797
411547
Bacillota
CTG
Gln
>WENV182738460
OJQJ01014868
411547
Bacillota
CTG
Gln
>WENV182738141
OJQJ01001358
147684
Bacillota
ACG
Arg
>WENV182738240
OJQJ01002684
4624
Bacillota
GCT
Ser
>WENV182738156
OJQJ01001532
235095
Bacillota
GGT
Thr
>WENV182738334
OJQJ01005713
235095
Bacillota
GGT
Thr
>WENV182738246
OJQJ01002834
411549
Bacillota
TTG
Gln
>WENV182737884
OJQJ01000104
235142
Bacillota
CTT
Lys
>WENV182738005
OJQJ01000410
235142
Bacillota
CTT
Lys
>WENV182738457
OJQJ01014675
59296
Bacillota
AAG
Leu
>WENV182737992
OJQJ01000341
148188
Bacillota
CCG
Arg
>WENV182738159
OJQJ01001582
80612
Bacillota
GTA
Tyr
>WENV182738108
OJQJ01001110
256380
Bacillota
>WENV182738192
OJQJ01001947
256380
Bacillota
>WENV182738447
OJQJ01013611
235127
Bacillota
TTT
Lys
>WENV182738290
OJQJ01003844
235124
Bacillota
TGG
Pro
>WENV182738415
OJQJ01011081
235124
Bacillota
TGG
Pro
>WENV182738133
OJQJ01001296
338129
Bacillota
TGT
Thr
>WENV182738303
OJQJ01004727
338129
Bacillota
TGT
Thr
>WENV182738584
OJQJ01040159
157838
Bacillota
GTC
Asp
>WENV182738506
OJQJ01021404
144583
Bacillota
ACG
Arg
>WENV182738275
OJQJ01003639
235171
Bacillota
CCA
Trp
>WENV182738059
OJQJ01000679
238974
Bacillota
GAA
Phe
>WENV182738455
OJQJ01014564
144621
Bacillota
GTT
Asn
>WENV182737803
OJQJ01000027
235113
Bacillota
GAA
Phe
>WENV182738349
OJQJ01006387
58712
Bacillota
CAG
Leu
>WENV182738169
OJQJ01001734
245296
Bacillota
CCC
Gly
>WENV182738191
OJQJ01001938
245296
Bacillota
CCC
Gly
>WENV182738298
OJQJ01004386
272992
Bacillota
CTT
Lys
>WENV182738400
OJQJ01010010
299139
Bacillota
TGC
Ala
>WENV182738147
OJQJ01001423
144594
Bacillota
CAC
Val
>WENV182738296
OJQJ01004377
144594
Bacillota
CAC
Val
>WENV182737957
OJQJ01000253
95563
Bacillota
GTA
Tyr
>WENV182738044
OJQJ01000606
414486
Bacillota
CCC
Gly
>WENV182738084
OJQJ01000850
272488
Bacillota
GAA
Phe
>WENV182737892
OJQJ01000108
114075
Bacillota
TAG
Leu
>WENV182738450
OJQJ01014094
338131
Bacillota
GCC
Gly
>WENV182738139
OJQJ01001344
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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