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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182748591
OJQX01000023
235097
Bacteroidota
TTT
Lys
>WENV182748620
OJQX01000035
235097
Bacteroidota
TTT
Lys
>WENV182748769
OJQX01000366
235097
Bacteroidota
TTT
Lys
>WENV182748894
OJQX01001204
235102
Bacteroidota
CGT
Thr
>WENV182749095
OJQX01005636
235102
Bacteroidota
CGT
Thr
>WENV182749389
OJQX01048934
144657
Bacteroidota
CGG
Pro
>WENV182748689
OJQX01000130
243025
Bacteroidota
CAT
Met
>WENV182749189
OJQX01011700
126966
Bacteroidota
TAC
Val
>WENV182749041
OJQX01003613
338155
Bacteroidota
CTC
Glu
>WENV182749243
OJQX01017167
153993
Bacteroidota
GAT
Ile
>WENV182748648
OJQX01000075
343138
Bacteroidota
CCT
Arg
>WENV182749158
OJQX01009412
46165
Bacteroidota
TGA
Ser
>WENV182748636
OJQX01000056
17323
Bacteroidota
GGA
Ser
>WENV182749023
OJQX01003292
338486
Bacteroidota
CAT
Met
>WENV182748666
OJQX01000098
415410
Bacteroidota
TTG
Gln
>WENV182748793
OJQX01000431
415410
Bacteroidota
TTG
Gln
>WENV182749060
OJQX01004046
136244
Bacteroidota
TAC
Val
>WENV182748630
OJQX01000049
411543
Bacteroidota
CTG
Gln
>WENV182749075
OJQX01004810
59689
Bacteroidota
CAG
Leu
>WENV182748573
OJQX01000011
344692
Bacteroidota
GGT
Thr
>WENV182748709
OJQX01000151
344692
Bacteroidota
GGT
Thr
>WENV182748715
OJQX01000167
341950
Bacteroidota
>WENV182748668
OJQX01000101
338124
Bacteroidota
CCG
Arg
>WENV182748737
OJQX01000239
338124
Bacteroidota
CCG
Arg
>WENV182749098
OJQX01005805
235203
Bacteroidota
TTT
Lys
>WENV182749021
OJQX01003289
238121
Bacteroidota
CTT
Lys
>WENV182749215
OJQX01014553
238121
Bacteroidota
CTT
Lys
>WENV182748739
OJQX01000243
338132
Bacteroidota
GCA
Cys
>WENV182748744
OJQX01000251
338132
Bacteroidota
GCA
Cys
>WENV182748983
OJQX01002380
338132
Bacteroidota
GCA
Cys
>WENV182749257
OJQX01019903
144688
Bacteroidota
CAT
Met
>WENV182749370
OJQX01039633
181746
Bacteroidota
GGC
Ala
>WENV182748954
OJQX01001894
58714
Bacteroidota
CAA
Leu
>WENV182748971
OJQX01002185
235165
Bacteroidota
CCA
Trp
>WENV182749002
OJQX01002870
144933
Bacteroidota
TCT
Arg
>WENV182748963
OJQX01002027
144656
Bacteroidota
GTG
His
>WENV182748815
OJQX01000505
235207
Bacteroidota
CAT
Met
>WENV182749355
OJQX01035803
144659
Bacteroidota
GTG
His
>WENV182748916
OJQX01001469
235180
Bacteroidota
CCA
Trp
>WENV182748711
OJQX01000161
80607
Bacteroidota
GTA
Tyr
>WENV182748869
OJQX01000866
80607
Bacteroidota
GTA
Tyr
>WENV182748749
OJQX01000288
52358
Bacteroidota
TGA
Ser
>WENV182748772
OJQX01000377
52358
Bacteroidota
TGA
Ser
>WENV182748854
OJQX01000713
52358
Bacteroidota
TGA
Ser
>WENV182748874
OJQX01000891
52358
Bacteroidota
TGA
Ser
>WENV182748902
OJQX01001324
52358
Bacteroidota
TGA
Ser
>WENV182748608
OJQX01000028
154643
Bacteroidota
CAT
Met
>WENV182748781
OJQX01000408
95559
Bacteroidota
TAG
Leu
>WENV182748685
OJQX01000126
419272
Bacteroidota
CTG
Gln
>WENV182748864
OJQX01000852
419272
Bacteroidota
CTG
Gln
>WENV182748757
OJQX01000334
144655
Bacteroidota
GGC
Ala
>WENV182748995
OJQX01002604
144639
Bacteroidota
GGC
Ala
>WENV182749068
OJQX01004558
95875
Bacteroidota
TAG
Leu
>WENV182749254
OJQX01019269
240012
Bacteroidota
CCC
Gly
>WENV182748974
OJQX01002269
147439
Bacteroidota
TCT
Arg
>WENV182749345
OJQX01033420
354570
Bacteroidota
TTC
Glu
>WENV182749283
OJQX01023627
244299
Bacteroidota
CGG
Pro
>WENV182749006
OJQX01002978
150485
Bacteroidota
GTT
Asn
>WENV182749139
OJQX01008469
150485
Bacteroidota
GTT
Asn
>WENV182748972
OJQX01002194
411550
Bacteroidota
CTG
Gln
>WENV182748629
OJQX01000049
132360
Bacteroidota
GGG
Pro
>WENV182748714
OJQX01000167
132360
Bacteroidota
GGG
Pro
>WENV182748723
OJQX01000200
132360
Bacteroidota
GGG
Pro
>WENV182748621
OJQX01000037
425638
Bacteroidota
CTG
Gln
>WENV182748759
OJQX01000339
19317
Bacteroidota
GGA
Ser
>WENV182749099
OJQX01005853
19317
Bacteroidota
GGA
Ser
>WENV182749166
OJQX01009834
19317
Bacteroidota
GGA
Ser
>WENV182748804
OJQX01000454
353927
Bacteroidota
TTC
Glu
>WENV182749289
OJQX01025076
347866
Bacteroidota
TTC
Glu
>WENV182749040
OJQX01003613
23696
Bacteroidota
GCT
Ser
>WENV182748577
OJQX01000013
414426
Bacteroidota
CTG
Gln
>WENV182748782
OJQX01000419
16224
Bacteroidota
GGA
Ser
>WENV182748686
OJQX01000126
16220
Bacteroidota
GGA
Ser
>WENV182748675
OJQX01000111
338125
Bacteroidota
CCT
Arg
>WENV182748707
OJQX01000150
338125
Bacteroidota
CCT
Arg
>WENV182748803
OJQX01000452
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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